prot_S-dermatodea_contig9161.17227.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9161.17227.1
Unique Nameprot_S-dermatodea_contig9161.17227.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length197
Homology
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BLAST of mRNA_S-dermatodea_contig9161.17227.1 vs. uniprot
Match: D7FMF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF8_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 6.710e-78
Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = 0 
Query:    3 MAQAPLDQGMASIQQDPSLALRRHVLSLYSLATNTDEVISTVYRSRCKFVDPIVSTRGQREVKAHFRSLKVIFRQCKAELASSHYDVASRTLTMDTTMVFKPKLWPFSAFRIRNFSVVVVGDNGLVKSHTDHWSAASLLETKLGWAYNVGRRALGAVSSVMIGWLTKDSSPRMI 176
            M Q+ L QG   +Q D SLALR  VLSLYSL TNTD VIS  Y  RCKFVDPIVSTRG REVKA FRSL+   R  KAEL SSHYDV S TLTMDTTMVFKPKLWPFS+FR++ F+VVVVG +GLV+SHTDHWS ASLLETK+GW Y  GRR  GAV+SV+ GWLTKDS+P ++
Sbjct:    1 MDQSTLIQG---VQFDTSLALRGKVLSLYSLDTNTDAVISEAYHRRCKFVDPIVSTRGHREVKAQFRSLRAFLRFSKAELVSSHYDVLSSTLTMDTTMVFKPKLWPFSSFRLKCFTVVVVGSDGLVRSHTDHWSVASLLETKIGWMYRAGRRLFGAVTSVLFGWLTKDSTPLVL 171
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9161.17227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMF8_ECTSI6.710e-7870.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 32..149
e-value: 5.6E-6
score: 28.3
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 39..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9161contigS-dermatodea_contig9161:774..6688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9161.17227.1mRNA_S-dermatodea_contig9161.17227.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9161 739..8805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9161.17227.1 ID=prot_S-dermatodea_contig9161.17227.1|Name=mRNA_S-dermatodea_contig9161.17227.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=197bp
MAMAQAPLDQGMASIQQDPSLALRRHVLSLYSLATNTDEVISTVYRSRCK
FVDPIVSTRGQREVKAHFRSLKVIFRQCKAELASSHYDVASRTLTMDTTM
VFKPKLWPFSAFRIRNFSVVVVGDNGLVKSHTDHWSAASLLETKLGWAYN
VGRRALGAVSSVMIGWLTKDSSPRMITAGSAAGSTAATARASSKSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf