prot_S-dermatodea_contig9103.17184.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9103.17184.1
Unique Nameprot_S-dermatodea_contig9103.17184.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length908
Homology
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 1.540e-148
Identity = 501/935 (53.58%), Postives = 551/935 (58.93%), Query Frame = 0
Query:   53 MELGRRRISEDDRERVS-HHSAAESTDTVTPSGSSARGVSPLNRSLGGGGAGGASSANDLHAPDRTVVSSSDPALHMLAAGGVSASG------RRPPSAGPSMDSSASSSVGVSAVLGGPGGGTGGVXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------VSGR-APPPS-----------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRGXXXXXXXXXXXXXXXXXXGEEHRVAVDDGYPTFGYRDPLANMSGAGGGGLQGPN------SP-PPPGMPMYAVQGDGYSTVPIQHAXXXXXXXXAQGMVSHLQP---HAHSIGQMQGPQGGGMD-GSIGGVGDQQ-LLAPHMSAMGSPPHPPMPAPQQMYMSAQGTYIVTSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIHSGGAGGMQPLMVYQPQGGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHMYLPMSQAGYGYIPQMAHLQA-GGVPVYQVAAPAVDANHNSSRPNGVAGGAXXXXXXGSHG----------TPGSPSIASPQQPTAPPASHQPSPQGFQVHYALTPQGIVPMVPMMPNGTGGFTNPALYPGLGGMYDDGRG-GMAGIPTIVAGMDGAGAGGVEKGRLSP-LPAGHGMHPRFAGSP--PXXXXXXXXXVQHQGAVQPMHAPAWSVGGAGVHDTG---RPGGYNEGXXXXXXXXXXXAGGQGSGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            M+LG+RRISED+RERVS HHS A  +            VS ++RSL        S+  D+    R  VSSSD ALH+LA GGV ASG       RPPSAGPSM+SSA SSVGVS+VLGGPG      XXXXX XXXXXXXXXXXXXXXXXXXX                               SGR AP P+                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXX      A+DDGYPTFGYRDPL NM G+G              SP PPPGMPMYAV  DG        A         QG+VSH  P   HAH++      QGGG+D G + GVGDQQ LLAPHM+ MGSPP PPM APQQ YM +QGTY+V +G+    XXXXXXXXXXXXXXXXXXXXX                MQP+++YQ QGGN        XXXXXX                                       S M+LPMSQAGYGY+PQMAHLQA GGVPVYQ+A   +D    ++R NG A G XXXXXX              +P SPS+ASPQ    P A H   PQ FQVHYA+TPQGIVPMVP++PNG GGFTNPALYPG+G MYDDGR  GM  +P + A MD    GGVEKGRLSP L A    HPRF+GSP  P         +Q     QPMHAPAWSVGG GVHD G     G  + G            GG   G                                         ESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPP+GD G +  E+DAVSAIF EALP+L MMM+DPFGNYLFQKLFVK+DDHQRLLAV
Sbjct:    1 MDLGKRRISEDERERVSSHHSNATDSVDGXXXXXXXXXVSSISRSL--------SATADM----RATVSSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMESSAGSSVGVSSVLGGPGXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGGDESRGVMVTSGRVAPQPTSGHHMSNGGIGRSASVGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIDDGYPTFGYRDPLTNMPGSGXXXXXXXXXXXXXXSPGPPPGMPMYAVHSDGGVXXXXXXAVNGGDAY-GQGVVSHAPPPHAHAHNL------QGGGLDNGPMSGVGDQQQLLAPHMNHMGSPPLPPMAAPQQPYMPSQGTYVVAAGDGGGSXXXXXXXXXXXXXXXXXXXXX----------------MQPMVLYQQQGGNGGAPQGQHXXXXXXHGQPGADQAAA---------------------------ASPMFLPMSQAGYGYVPQMAHLQAAGGVPVYQMAGAGIDGGQANARANGGASGXXXXXXXXXXXXXXXXXXGRVSPLSPSVASPQ----PGAPH---PQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGVGGGVEKGRLSPPLGAPMQQHPRFSGSPTHPPPHVHHPGGLQQPQQQQPMHAPAWSVGG-GVHDVGGAPHMGYLDAGGGGYADGSGYRGGGXXPGGPVQDFIRGARTAREGEAGRDIKDRRKRLDR----------ESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEASEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAV 855          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 1.970e-109
Identity = 237/400 (59.25%), Postives = 262/400 (65.50%), Query Frame = 0
Query:  531 SHMYLPMSQAGYGYIPQMAHLQAGG-VPVYQVAAPAVDANHNSSRPNGVAGGAXXXXXXGSHG------TPGSPSIASPQQPTAPPASHQPSPQGFQVHYALTPQGIVPMVPMMPNGTGGFTNPALYPGLGGMYDDGRG-GMAGIPTIVAGMDGAGAGGVEKGRLSP-LPAGHGMHPRFAGSP---PXXXXXXXXXVQHQGAVQPMHAPAWSVGGAGVHDTGRP----------GGYNEGXXXXXXXXXXXAGGQGSGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            S M+LPMSQAGYGY+PQMAHLQAGG VPVYQ+A   +D    ++R NGVA G  XXXXX          +P SPS+ASPQ       +  P PQ FQVHYA+TPQGIVPMVP++PNG GGFTNPALYPG+G MYDDGR  GM  +P + A MD    GGVEKGRLSP L A    HPRF+GSP   P    XXXXX        PMHAPAWSVGG GVHD G            GGY +G           +G +G G  XXXXX                                  ESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPP+GD G +P E+DAVSAIF EALP+L MMM+DPFGNYLFQKLFVK+DDHQRLLAV
Sbjct:   93 SPMFLPMSQAGYGYVPQMAHLQAGGGVPVYQMAGAGIDGGQANARANGVASGGGXXXXXXXXXXXXGRVSPLSPSVASPQ-------AGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGAGGGVEKGRLSPPLAAPMQQHPRFSGSPTHPPPHVHXXXXXXXXXXXXXPMHAPAWSVGG-GVHDVGGAPHMGYLDAGGGGYADG-----------SGYRGGGXXXXXXXQDFIRGARTAREGEAGRDIKDRRKRLDR------ESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAV 467          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: D7FSX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX5_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.160e-46
Identity = 117/175 (66.86%), Postives = 130/175 (74.29%), Query Frame = 0
Query:    1 PRLAVGSKGHHRETVSGDF-TVSTEAGDTSYGSSVDSLFHRGGLESLRSDFLKMELGRRRISEDDRERVS-HHS-AAESTDTVTPSGSSARGVSPLNRSLGGGGAGGASSANDLHAPDRTVVSSSDPALHMLAAGGVSASG------RRPPSAGPSMDSSASSSVGVSAVLGGPG 166
            PRLAVGSKGHHRE+ SGD+ TVSTEAGDTSYGSS+DSLFHRGGLESLRSDFLKM+LG+RRISED+RERVS HHS A +S D           VS ++RSL        S+  D+    R  VSSSD ALH+LA GGV ASG       RPPSAGPSMDSSA SSVGVS+VLGGPG
Sbjct:   69 PRLAVGSKGHHRESASGDYLTVSTEAGDTSYGSSMDSLFHRGGLESLRSDFLKMDLGKRRISEDERERVSSHHSNATDSVDGXXXXXXXXXXVSSISRSL--------SATGDV----RVTVSSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMDSSAGSSVGVSSVLGGPG 231          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A7S2PAP6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PAP6_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.670e-14
Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 0
Query:  811 MAALLEATR-PALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            + AL ++TR PAL ++LG V  +SRDQVGCRLLQQ LDE      DG         DA +AI +E LP L   M DPFGNYLFQK+  K++D +RL  +
Sbjct:  351 ITALYQSTRRPALSELLGHVRRLSRDQVGCRLLQQSLDE------DG--------PDAATAILQEGLPFLAEAMTDPFGNYLFQKILEKVNDEERLRLI 435          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A7S2XW35_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW35_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.510e-14
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 0
Query:  810 DMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQ 893
            D+ A +  ++  L+D+LG V+ +S+DQVGCRLLQQKLDE          GG    E+ V+AIFEE+   L  M++DPFGNYLFQ
Sbjct:   41 DIFAAIGTSKLKLEDILGSVFRLSKDQVGCRLLQQKLDE----------GG----EEVVTAIFEESRTKLAEMIIDPFGNYLFQ 110          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A7S0GC10_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC10_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.130e-14
Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 0
Query:  815 LEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            L ++RP L  +LG V  +SRDQVGCRLLQQ LDE      DG V        A +AI +E +P L   M DPFGNYLFQK+  K++D +RL+ +
Sbjct:  247 LSSSRPPLSSLLGHVRRLSRDQVGCRLLQQSLDE------DGPV--------AATAILQEGIPFLAETMTDPFGNYLFQKVLEKVNDEERLILI 326          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.650e-13
Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  821 ALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            A++D+ G+VY+MS+DQ GCRLLQ++LD C  RP            D    I+ EALP L  MMVDPFGNYLFQKL  ++ D QRL  V
Sbjct:  254 AVEDLQGRVYAMSKDQNGCRLLQEQLD-CVGRP------------DLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIV 328          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.920e-12
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  810 DMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            D A+ L      + D+ G+VY+MS+DQ GCRLLQ++LD   DR             D    I+ E+LP L  MMVDPFGNYLFQKL  ++ D QRL+ V
Sbjct:  325 DSASSLFGATLTIDDIQGRVYAMSKDQNGCRLLQEQLDFV-DR------------SDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVV 410          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: A0A067BXZ3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXZ3_SAPPC)

HSP 1 Score: 81.6 bits (200), Expect = 3.370e-12
Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  824 DVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            D+LG+VY+MS+DQ GCRLLQ++LD                  D    I+ EA+P L  MMVDPFGNYLFQKL  ++ D QRL+ V
Sbjct:  274 DLLGRVYAMSKDQNGCRLLQEQLDG---------------RSDLCDVIYTEAVPHLVDMMVDPFGNYLFQKLLERVTDAQRLVIV 343          
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Match: F0WL38_9STRA (Uncharacterized protein AlNc14C140G7225 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL38_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.390e-11
Identity = 44/86 (51.16%), Postives = 55/86 (63.95%), Query Frame = 0
Query:  823 KDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKIDDHQRLLAV 908
            +D+ G+VYSMS+DQ GCRLLQ++L E  DR            +     IF+E+L  LP MMVDPFGNYLFQKL  + D+ QRL  V
Sbjct:  526 EDIKGRVYSMSKDQNGCRLLQEQL-EYDDR------------KTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIV 598          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9103.17184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG61_9PHAE1.540e-14853.58PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FSX6_ECTSI1.970e-10959.25PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FSX5_ECTSI1.160e-4666.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2PAP6_9STRA1.670e-1450.51Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2XW35_9STRA2.510e-1450.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0GC10_9STRA6.130e-1448.94Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1V9YPP5_9STRA4.650e-1352.27Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KML4_9STRA2.920e-1246.46Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067BXZ3_SAPPC3.370e-1249.41Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
F0WL38_9STRA1.390e-1151.16Uncharacterized protein AlNc14C140G7225 n=1 Tax=Al... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 493..513
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 479..906
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 479..906
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 874..908
e-value: 10.0
score: 12.8
coord: 824..859
e-value: 5.5
score: 14.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 818..908
e-value: 9.2E-18
score: 66.0
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 800..908
score: 14.98
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 819..906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9103contigS-dermatodea_contig9103:805..8715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9103.17184.1mRNA_S-dermatodea_contig9103.17184.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9103 805..8715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9103.17184.1 ID=prot_S-dermatodea_contig9103.17184.1|Name=mRNA_S-dermatodea_contig9103.17184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=908bp
PRLAVGSKGHHRETVSGDFTVSTEAGDTSYGSSVDSLFHRGGLESLRSDF
LKMELGRRRISEDDRERVSHHSAAESTDTVTPSGSSARGVSPLNRSLGGG
GAGGASSANDLHAPDRTVVSSSDPALHMLAAGGVSASGRRPPSAGPSMDS
SASSSVGVSAVLGGPGGGTGGVGGGGGGVGASGGGGGGDGSRGGVSGGVS
GRAPPPSHQNHHAGNGGVGRSSGGGGGGGGGHRGGGGGGDRERDRDRRHG
GGGGGGGGGYRGHSGAGGRSGGGGQGYTGSGEEHRVAVDDGYPTFGYRDP
LANMSGAGGGGLQGPNSPPPPGMPMYAVQGDGYSTVPIQHAYALTGDAYA
QGMVSHLQPHAHSIGQMQGPQGGGMDGSIGGVGDQQLLAPHMSAMGSPPH
PPMPAPQQMYMSAQGTYIVTSGNGGGGSNGVSSAGGAGIGAGAGGGGGGS
GGAGGHIHSGGAGGMQPLMVYQPQGGNAAPQQQQQQQPPPPPQQQQQQQL
QQQQQLQQQQQQQGQSTGAEQAAAAAAAATSHMYLPMSQAGYGYIPQMAH
LQAGGVPVYQVAAPAVDANHNSSRPNGVAGGAGAGAGTGSHGTPGSPSIA
SPQQPTAPPASHQPSPQGFQVHYALTPQGIVPMVPMMPNGTGGFTNPALY
PGLGGMYDDGRGGMAGIPTIVAGMDGAGAGGVEKGRLSPLPAGHGMHPRF
AGSPPPPPPHPHSHVQHQGAVQPMHAPAWSVGGAGVHDTGRPGGYNEGGG
GGYRGGGGGAGGQGSGADGLRGPGGGGGGGMSARDARMARDGDAGKDVKD
RRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECP
DRPPDGDVGGKPCEEDAVSAIFEEALPDLPMMMVDPFGNYLFQKLFVKID
DHQRLLAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold