prot_S-dermatodea_contig90830.17162.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90830.17162.1
Unique Nameprot_S-dermatodea_contig90830.17162.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length72
Homology
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 3.380e-38
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPE  AEDLVFAGDNFIR
Sbjct:  299 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPETAAEDLVFAGDNFIR 369          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.640e-33
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQM TTVRNLRIREDRAKYLYNLDP+SAYYDPKTRAMR+NP P AN E+L +AGDNF+R
Sbjct:  262 QGRVARQGGLGGAQMATTVRNLRIREDRAKYLYNLDPDSAYYDPKTRAMRENPNPSANPEELAYAGDNFMR 332          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A6G0RVC6_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RVC6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.200e-32
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    3 RVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R
Sbjct:    5 RVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYVGDNIAR 73          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A7S2MS38_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MS38_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.180e-31
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            Q R+ARQGG+GGAQMKTTVRNLRIRED AKYL NLDPNSAYYDPKTR+MRDNP+P  N E++ +AGDNF R
Sbjct:  164 QKRIARQGGIGGAQMKTTVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPLPNENPEEVQYAGDNFSR 234          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A6A3U154_9STRA (Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U154_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.430e-31
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    3 RVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            RVARQGG+GGAQMKTTVRNLRIR+D AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R
Sbjct:    5 RVARQGGVGGAQMKTTVRNLRIRDDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYVGDNIAR 73          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A7S1UIW3_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIW3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.820e-31
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            QGRVARQGG+GGAQM TTVRNLR+RED AKYL NLDPNSAYYDPK+RAMRDNP+P  +   LV+AGDNF+R
Sbjct:   72 QGRVARQGGVGGAQMFTTVRNLRVREDTAKYLLNLDPNSAYYDPKSRAMRDNPLPHMDPNKLVYAGDNFVR 142          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A7S2V1R9_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1R9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.070e-31
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQMKTTVRNLRIRED AKYL NLDPNSA+YDPKTR+MR NP P  +AE+ ++AGDN++R
Sbjct:  255 QGRVARQGGLGGAQMKTTVRNLRIREDTAKYLRNLDPNSAFYDPKTRSMRANPTPHLDAENTLYAGDNWVR 325          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: W7TVH6_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVH6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 8.500e-31
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            QGRVARQGG+GGAQMK +VRNLRIRED AKYL NLDPNSAYYDPKTRAMRDNP+P  + E+L +AGDN++R
Sbjct:  242 QGRVARQGGVGGAQMKVSVRNLRIREDTAKYLRNLDPNSAYYDPKTRAMRDNPLPGTHPEELAYAGDNYVR 312          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A7S2SN22_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN22_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.540e-30
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            Q R+ARQGG+GGAQMKTTVRNLRIRED AKYL NLDPNSAYYDPKTR+MRDNP+P  N ED+ FAGDN+ R
Sbjct:  312 QKRIARQGGVGGAQMKTTVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPLPAENPEDIPFAGDNYQR 382          
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Match: A0A7R9U7Z6_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.340e-30
Identity = 55/71 (77.46%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQM TTVRNLR+RED+AKYL NLDPNSAYYDPK+R+MR+NP+P  +    V+AGDNFIR
Sbjct:  260 QGRVARQGGLGGAQMATTVRNLRLREDKAKYLLNLDPNSAYYDPKSRSMRENPLPHLDPAQAVYAGDNFIR 330          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90830.17162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU41_ECTSI3.380e-3897.18Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus T... [more]
A0A836CLD5_9STRA1.640e-3385.92Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema mi... [more]
A0A6G0RVC6_9STRA1.200e-3279.71Pre-mRNA-splicing factor SLU7 n=2 Tax=Phytophthora... [more]
A0A7S2MS38_9STRA1.180e-3178.87Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=D... [more]
A0A6A3U154_9STRA1.430e-3178.26Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora... [more]
A0A7S1UIW3_9STRA5.820e-3178.87Pre-mRNA-splicing factor SLU7 n=1 Tax=Phaeomonas p... [more]
A0A7S2V1R9_9STRA6.070e-3178.87Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=F... [more]
W7TVH6_9STRA8.500e-3178.87Pre-mRNA-splicing factor SLU7 n=2 Tax=Monodopsidac... [more]
A0A7S2SN22_9STRA1.540e-3080.28Pre-mRNA-splicing factor SLU7 n=2 Tax=Rhizochromul... [more]
A0A7R9U7Z6_9STRA4.340e-3077.46Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021715Pre-mRNA-splicing factor SLU7 domainPFAMPF11708Slu7coord: 13..71
e-value: 1.2E-27
score: 97.4
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 13..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90830contigS-dermatodea_contig90830:284..499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90830.17162.1mRNA_S-dermatodea_contig90830.17162.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90830 284..499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90830.17162.1 ID=prot_S-dermatodea_contig90830.17162.1|Name=mRNA_S-dermatodea_contig90830.17162.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=72bp
QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMR
DNPMPEANAEDLVFAGDNFIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021715Slu7_dom
IPR039974Splicing_factor_SLU7