prot_S-dermatodea_contig90752.17158.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90752.17158.1
Unique Nameprot_S-dermatodea_contig90752.17158.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length43
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig90752.17158.1 vs. uniprot
Match: D8LBZ7_ECTSI (Proteasome assembly chaperone 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ7_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.430e-11
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    1 PLVVLLHFCGEGDNTPHAIEMAEAVNAVLDVLPGDGAGGGE 41
            PLVVLL FCGEGDNTP AIEMA+AVNA L +LPG G G GE
Sbjct:  281 PLVVLLRFCGEGDNTPEAIEMAQAVNASLKLLPGGGDGEGE 321
[Close]
BLAST of mRNA_S-dermatodea_contig90752.17158.1 vs. uniprot
Match: A0A7M7G0Q6_STRPU (Proteasome assembly chaperone 2 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7G0Q6_STRPU)

HSP 1 Score: 47.4 bits (111), Expect = 6.480e-5
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    1 PLVVLLHFCGEGDNTPHAIEMAEAVNAVLDVLP 33
            P+ VLL FC EGDNTPHA+ MA   NA+L ++P
Sbjct:  212 PMAVLLLFCAEGDNTPHAMMMASFTNALLHLIP 244
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90752.17158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBZ7_ECTSI2.430e-1178.05Proteasome assembly chaperone 2 n=2 Tax=Ectocarpus... [more]
A0A7M7G0Q6_STRPU6.480e-560.61Proteasome assembly chaperone 2 n=1 Tax=Strongyloc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90752contigS-dermatodea_contig90752:161..289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90752.17158.1mRNA_S-dermatodea_contig90752.17158.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90752 161..289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90752.17158.1 ID=prot_S-dermatodea_contig90752.17158.1|Name=mRNA_S-dermatodea_contig90752.17158.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=43bp
PLVVLLHFCGEGDNTPHAIEMAEAVNAVLDVLPGDGAGGGEKG
back to top