prot_S-dermatodea_contig90733.17156.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90733.17156.1
Unique Nameprot_S-dermatodea_contig90733.17156.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length49
Homology
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A2I4Q2M4_9PHAE (Putative plastid-specific 30S ribosomal protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M4_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.790e-16
Identity = 27/49 (55.10%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENVT 49
            T+++FWP+E  W++LKN+LYNKPW++ ++R+E+LN ++ II YWL+NVT
Sbjct:   36 TTYFFWPSENGWKLLKNELYNKPWVTDEERVELLNGYNKIIKYWLKNVT 84          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A8F0F7A3_9PHAE (Uncharacterized protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A3_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.050e-15
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  WE+LK +L NKPW++ +DRIEILN +  IINYWL NV
Sbjct:   40 TTFFFWPRENGWELLKMELSNKPWITKEDRIEILNGYTLIINYWLSNV 87          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: D1GJM8_FUCVE (Conserved hypothetical plastid protein n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJM8_FUCVE)

HSP 1 Score: 69.7 bits (169), Expect = 3.130e-14
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  W++LK +L  KPW+S +D I+ILNS++ IINYWL NV
Sbjct:   36 TTFFFWPRENGWQLLKEELSCKPWISKEDSIDILNSYNEIINYWLRNV 83          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A8E5XRJ5_9PHAE (Uncharacterized protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ5_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 4.910e-14
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            TS +FWP E  WE+L+ +L +KPW++ ++RIEILN +  IINYWLENV
Sbjct:   40 TSLFFWPRENGWELLRAELSDKPWMTKEERIEILNGYTKIINYWLENV 87          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A0Y0KCK9_9PHAE (Ycf65 n=12 Tax=Sargassum TaxID=3015 RepID=A0A0Y0KCK9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.030e-14
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  W++LK +L  KPW+S +D I+ILN ++ IINYW+ENV
Sbjct:   41 TTFFFWPRENGWQLLKEELSCKPWISKEDSIDILNGYNEIINYWIENV 88          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: D1J701_ECTSI (Probable plastid-specific 30S ribosomal protein n=6 Tax=Ectocarpales TaxID=2877 RepID=D1J701_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.530e-13
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  W++LK +L  KPW+S  D I+ILN++  IINYWL NV
Sbjct:   35 TTFFFWPRENGWQLLKEELSYKPWMSKDDSIDILNNYTTIINYWLSNV 82          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A1L2F1K2_9PHAE (Ycf65 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1K2_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.080e-13
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENVT 49
            T+F+FWP E  W++LK +L  KPW+S +D I+ILN +  IINYW++NV+
Sbjct:   41 TTFFFWPRENGWQLLKEELSCKPWISKEDSIDILNGYSEIINYWVKNVS 89          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A0R6M0Q9_UNDPI (Putative plastid-specific 30S ribosomal protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0R6M0Q9_UNDPI)

HSP 1 Score: 66.2 bits (160), Expect = 7.090e-13
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  W++LK +L  KPW+S  D I+ILN++  IINYWL NV
Sbjct:   35 TTFFFWPRENGWQLLKEELSYKPWMSKDDSIDILNAYTEIINYWLVNV 82          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A8F0FAW0_9PHAE (Uncharacterized protein n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0FAW0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.460e-12
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  W++LK +L  KPW+S  D I+ILN +  IINYWL NV
Sbjct:   36 TTFFFWPRENGWQLLKEELSYKPWMSKDDSIDILNGYTEIINYWLLNV 83          
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Match: A0A8F0FAU8_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAU8_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.020e-12
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENV 48
            T+F+FWP E  W++LK +L  KPW+S  + I+ILN +  +INYWL+NV
Sbjct:   35 TTFFFWPRENGWQLLKEELSYKPWISKDESIDILNGYSNLINYWLKNV 82          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90733.17156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I4Q2M4_9PHAE1.790e-1655.10Putative plastid-specific 30S ribosomal protein n=... [more]
A0A8F0F7A3_9PHAE1.050e-1562.50Uncharacterized protein n=1 Tax=Protohalopteris sp... [more]
D1GJM8_FUCVE3.130e-1458.33Conserved hypothetical plastid protein n=3 Tax=Fuc... [more]
A0A8E5XRJ5_9PHAE4.910e-1458.33Uncharacterized protein n=1 Tax=Ishige okamurae Ta... [more]
A0A0Y0KCK9_9PHAE5.030e-1456.25Ycf65 n=12 Tax=Sargassum TaxID=3015 RepID=A0A0Y0KC... [more]
D1J701_ECTSI3.530e-1356.25Probable plastid-specific 30S ribosomal protein n=... [more]
A0A1L2F1K2_9PHAE4.080e-1353.06Ycf65 n=1 Tax=Coccophora langsdorfii TaxID=74099 R... [more]
A0A0R6M0Q9_UNDPI7.090e-1356.25Putative plastid-specific 30S ribosomal protein n=... [more]
A0A8F0FAW0_9PHAE1.460e-1256.25Uncharacterized protein n=3 Tax=Laminariales TaxID... [more]
A0A8F0FAU8_9PHAE2.020e-1252.08Uncharacterized protein n=1 Tax=Desmarestia aculea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006924Ribosomal protein PSRP-3/Ycf65PFAMPF04839PSRP-3_Ycf65coord: 1..46
e-value: 3.4E-18
score: 65.6
IPR006924Ribosomal protein PSRP-3/Ycf65PANTHERPTHR35108FAMILY NOT NAMEDcoord: 2..46
IPR038447PSRP-3/Ycf65 superfamilyGENE3D1.20.58.750coord: 1..49
e-value: 4.0E-15
score: 57.6
NoneNo IPR availablePANTHERPTHR35108:SF1coord: 2..46
NoneNo IPR availablePRODOMPD015453coord: 1..44
e-value: 1.0E-8
score: 136.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90733contigS-dermatodea_contig90733:453..599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90733.17156.1mRNA_S-dermatodea_contig90733.17156.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90733 453..599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90733.17156.1 ID=prot_S-dermatodea_contig90733.17156.1|Name=mRNA_S-dermatodea_contig90733.17156.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=49bp
TSFYFWPNEEAWEILKNDLYNKPWLSIKDRIEILNSFHYIINYWLENVT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006924Ribosomal_PSRP3/Ycf65
IPR038447PSRP-3/Ycf65_sf