prot_S-dermatodea_contig9063.17149.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9063.17149.1
Unique Nameprot_S-dermatodea_contig9063.17149.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length445
Homology
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 4.440e-73
Identity = 243/532 (45.68%), Postives = 267/532 (50.19%), Query Frame = 0
Query:    1 YRIWIHRTRVLLPQLFLQRLNTACIWSDCVSGIIVTAAIILSFLSLMTFADFLADHLLRDDWGGIGLDGMNFVEAVAEAMEDLRFDN-----HDR----------------------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAFAARGDPNAFDDRDDSDERTDDGFSFVEEAAVTDSYDEDSPRGANGSRVAAGREARSG------PTDA----ATDREGRFGREAT--------TSGG----------------------------RCVGEQXXXXXXXXXSNADG-------------EATLLDTFLDLEYRPPTPPRKGRGTGRTXXXXXXXXXXXXXXXXXXAGRAGGERDASGVVEPSRPRRALEAPEESGEELVGDVSGPAAAGDAEISSPAPALAPAPRGGGRAGLGQAAEAAAAAVDDGIAEEDHDDLDDGFLDGDLDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLDPHVLASLGNRSP-HGFLRNLVQ 445
            YRIWIHRTRVLLPQLFLQRLN ACIWSDC+SGIIVTAAIILSFLSLMTFADFLAD LLRDD+GGIGLDGMN VEA+AEAM+DLR DN     HDR                             XXXXXXXXXXXXXXXXXXXXXX RAA    G     D+R   +    +  + +EE                  R AA REA SG      P D     A D + R G  +T          GG                                E+          N D              EA   DTFL L+YRPPTPPRKG G GR              XXXXX                + PR   +                                          +GQ      AA ++   EE  DDL+D FLDGD+DVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASV HAVSKYLDPHVL+SLG RS  +  LR++VQ
Sbjct:  174 YRIWIHRTRVLLPQLFLQRLNMACIWSDCISGIIVTAAIILSFLSLMTFADFLADQLLRDDFGGIGLDGMNLVEAMAEAMDDLRIDNNNNQVHDRVPPPPQEPQQLGPLPGHAPDRRANHGHGGXXXXXXXXXXXXXXXXXXXXXXXRAAEPPAGGGRP-DNRGVGEAHQGEALAAIEER-----------------RPAAPREAESGGGSPAHPADGSARDADDHDRRIGSNSTGXXXXXXXAHGGVKAEGLATEERNIPREGERVSVPELAESAAAAERQNLAQPRFRRNVDPMAYDTDDEEGEEEEAAPGDTFLGLKYRPPTPPRKGGGQGRAAQSRTRRWSGHKDXXXXXXXXXXXXXXLRAGANNAEPRVRADGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGQVPRVPLAADEE---EEPEDDLNDEFLDGDMDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVTHAVSKYLDPHVLSSLGGRSELYLALRDVVQ 684          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 1.570e-66
Identity = 240/610 (39.34%), Postives = 272/610 (44.59%), Query Frame = 0
Query:    1 YRIWIHRTRVLLPQLFLQRLNTACIWSDCVSGIIVTAAIILSFLSLMTFADFLADHLLRDDWGGIGLDGMNFVEAVAEAMEDLRFDNHDREEXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAFAAR----GDPNA--------FDDRDDSDERTDDGFSFVEEAAVTDSYDEDSPRGANGSRVAAGREARSG------PTDAAT---DREGRFGREATTSG-------------------------------------GRCVGEQXXXXXXXXXSNADGEATLLD-------------TFLDLEYRPPTPPRKGR-----GTGRTXXXXXXXXXXXXXXXXXXAG----------RAGGERDASGVVEPSRPRRALEAPEESGEELVGDVSGPAAAGD------------------------------------------AEISSPAPALAPAPR--GGGRAGLG------------------QAAEAAAA----------------AVDDGIAEEDHDDLDDGFLDGDLDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLDPHVLASLGNRSP-HGFLRNLVQ 445
            YRIWIHRTRVLLPQLFLQRLN ACIWSDC+SGIIVTAAIILSFLSLMTFADFLAD LLRDD+GGIGLDGMN VEA+AEAM+DLR DN++  +                            +     R    GD  A           R         G        V +++  ++       R AA REA SG      P D +    D + R G E+T  G                                          EQ          N D  A   D             TFL L+YR PTPPRK R      T          XXXXXXXXXXXAG           A GE+ + G V+ +  R             VG   GPAAA                                            A + + A    P  R  GGG                       + AE A A                A D+   E+  DDL+D FLDGD+DVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASV HAVSKYLDPHVLASLG RS  +  LR+++Q
Sbjct:  174 YRIWIHRTRVLLPQLFLQRLNMACIWSDCISGIIVTAAIILSFLSLMTFADFLADQLLRDDFGGIGLDGMNLVEAMAEAMDDLRIDNNNNNQVHDQLPPPLQEPQQLGPLPGHAPDRRANQGHRGGRVGGVGDAVAPXXXXXXXXAGRGARAAEPPTGGGRPNNRGVGEAHQGEALAAIGERRSAAPREAESGGASPAPPADGSARDADHDRRIGNESTVGGXXXXXAHRGVSAEGLATEEINLPRDGERVSVPEVAESAAAAAEQRNFAQPRFRRNVDPMAYDTDDAEGEEEEAGPGGTFLGLKYRAPTPPRKVRIEDDDATSSKDVASASAXXXXXXXXXXXAGARITARTTREEAKGEQHSLGRVDGAATR-------------VGFSRGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXMPKIDEEGXXXXXXXXXDAAALRAGANNAEPRVRADGGGXXXXXXXXXXXXXXXXXXXXXXPENAEPAVAGAXXXXXXXPVPRVPLAADE--EEDPEDDLNDEFLDGDMDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVTHAVSKYLDPHVLASLGGRSELYPALRDVLQ 768          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A7S2CYG7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYG7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.720e-19
Identity = 124/441 (28.12%), Postives = 166/441 (37.64%), Query Frame = 0
Query:    1 YRIWIHRTRVLLPQLFLQRLNTACIWSDCVSGIIVTAAIILSFLSLMTFADFLADHLLRDDWGGIGLDGMNFVEAVAEAMEDLR-FDNHDREEXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAFAARGDPNAFDDRDDSDERTDDGFSFVEEAAVTDSYDEDSPRGANGSRVAAGREARSGPTDAATDREGR---FGREATTSGGRCVGEQXXXXXXXXXSNADGEATLL----DTFLDLEYRPPTPPRKGRGTGRTXXXXXXXXXXXXXXXXXXAGRAGGERDASGVVEPSRPRRALEAPEESGEELVGDVSGPAAAGDAEISSPAPALAPAPRGGGRAGLGQAAEAAAAAVDDGIAEEDHDDLDDGFLDGDLDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLDPHVLASLGN 433
            YRIWIHR+R+     F+QR+  AC+WSDCVSGIIV AAIILSFLSLM+F DFL  H     W  IG       E      EDL+ FDN D +E                               F  +GD                                             G  AR+  TD +T+ + +      EAT +  R V             +    A       + + D  +  P                                    E   S   +PS   + L A    G+E   + +  A    AE + P P + P                       G                 +++H+A+DEL+GIRGPVT+LLRN+LWLLAF+ AYLGLFAF PFSIG+SV+  +  Y++  V+ +L N
Sbjct:   41 YRIWIHRSRI-----FMQRITIACLWSDCVSGIIVAAAIILSFLSLMSFTDFLRFH-----WD-IG----EAEEGDGVEEEDLQQFDNVDPQEQPLPPQQE--------------------EIGFDVQGD---------------------------------------------GDHARASTTDESTEEDSQKLAMAEEATGAEARFVASDGFSSHMRDNDSPAAPAASASRAEEVWEDQGHHKPE---------------------------------SNEPQTSSQQDPSPGDQPLLAAAVEGQETANEAAHQADEHVAE-NDPVPQINPI----------------------GNQXXXXXXXXXXXXXXXMELHVAVDELVGIRGPVTILLRNMLWLLAFNCAYLGLFAFIPFSIGSSVLSTLGSYVNSPVMVALNN 345          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A835YNH4_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.950e-16
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    1 YRIWIHRTRVLLPQLFLQRLNTACIWSDCVSGIIVTAAIILSFLSLMTFADFLADH-LLRDDW 62
            YR+WIHR+R+LLP   +QR+  AC W DCVSG I+ AAIILSFLSLMTFADF+AD  LLR++W
Sbjct:  156 YRVWIHRSRMLLPAQLMQRMTLACAWGDCVSGAIIAAAIILSFLSLMTFADFIADQILLREEW 218          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A7S2RW40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.410e-15
Identity = 45/78 (57.69%), Postives = 62/78 (79.49%), Query Frame = 0
Query:  367 LDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLDPHVLASLGNRSPHGFLRNLV 444
            +++H+A+DELLGIRGP+T+LLRN+LWLLAF+ AYLGLFAF PFSIG+S++ +V + +D  VL +     P G LR +V
Sbjct:  459 VELHVALDELLGIRGPITVLLRNILWLLAFNCAYLGLFAFIPFSIGSSILASVRRNVDSPVLLAALELVPQG-LRQVV 535          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: W7U493_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U493_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.590e-14
Identity = 39/64 (60.94%), Postives = 54/64 (84.38%), Query Frame = 0
Query:  363 LDGDLDV--HMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLD 424
            +D D+DV  H+A+DEL+G+RGP   L+RN+LWL+AF+GAYLGLFAF P+S+GA+VV A  KY++
Sbjct:   82 IDADMDVELHVAVDELMGVRGPFVYLVRNILWLVAFNGAYLGLFAFIPYSVGAAVVGAAEKYVE 145          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A4D9D1W8_9STRA (RING-CH-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.740e-13
Identity = 35/58 (60.34%), Postives = 51/58 (87.93%), Query Frame = 0
Query:  367 LDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLD 424
            +++H+A+DEL+G+RGP   L+RN+LWL+AF+GAYLGLFAF P+S+GA+VV A  KY++
Sbjct:  301 VELHVAVDELMGVRGPFVYLVRNILWLVAFNGAYLGLFAFIPYSVGAAVVGAAEKYVE 358          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A7S2WFJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WFJ1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.690e-11
Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = 0
Query:  366 DLDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSK 421
            D+D+H+A+DELLG+RGP++ LLRN+LWLLAF+  YLGLFAF P+SIG++    +S 
Sbjct:  531 DVDIHVALDELLGLRGPISALLRNLLWLLAFNMTYLGLFAFIPYSIGSTAYSTLSN 586          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A067CK26_SAPPC (RING-CH-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CK26_SAPPC)

HSP 1 Score: 76.6 bits (187), Expect = 3.910e-11
Identity = 34/70 (48.57%), Postives = 55/70 (78.57%), Query Frame = 0
Query:  367 LDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKY------LDPHVLAS 430
            +++++A+DEL+G RGP+ +L+RNV W LAF+GAYLG+FAF P+++G+++V  V+K+      LDP +L S
Sbjct:  377 MEINIAMDELVGFRGPLYLLVRNVSWFLAFNGAYLGIFAFIPYTLGSTIVSTVAKFSFALPPLDPSILES 446          
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Match: A0A7S4W2J4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W2J4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.280e-11
Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  357 DLDDGFLDGDLDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAYLGLFAFFPFSIGASVVHAVSKYLDPHVLASLGNRSP 436
            D DDG    D+++H+A+DELLG+RGP+  L+RN+LWLLAF+  YLGLFAF P +IG SV    S   +  VL+S+ +R P
Sbjct:  481 DQDDGM---DMEIHVALDELLGLRGPLFALVRNLLWLLAFNTTYLGLFAFIPHTIGESVYSTAS---NSTVLSSVISRLP 554          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9063.17149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR1_ECTSI4.440e-7345.68RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JWM1_9PHAE1.570e-6639.34RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S2CYG7_9STRA1.720e-1928.12Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YNH4_9STRA4.950e-1668.25RING-CH-type domain-containing protein n=1 Tax=Tri... [more]
A0A7S2RW40_9STRA3.410e-1557.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U493_9STRA1.590e-1460.94Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9D1W8_9STRA1.740e-1360.34RING-CH-type domain-containing protein n=1 Tax=Nan... [more]
A0A7S2WFJ1_9STRA2.690e-1160.71Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A067CK26_SAPPC3.910e-1148.57RING-CH-type domain-containing protein n=2 Tax=Sap... [more]
A0A7S4W2J4_9STRA4.280e-1152.50Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13145SSM4 PROTEINcoord: 12..424
NoneNo IPR availablePANTHERPTHR13145:SF0E3 UBIQUITIN-PROTEIN LIGASE MARCH6coord: 12..424
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 390..411
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 412..445
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..389
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 390..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9063contigS-dermatodea_contig9063:137..2571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9063.17149.1mRNA_S-dermatodea_contig9063.17149.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9063 137..2571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9063.17149.1 ID=prot_S-dermatodea_contig9063.17149.1|Name=mRNA_S-dermatodea_contig9063.17149.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=445bp
YRIWIHRTRVLLPQLFLQRLNTACIWSDCVSGIIVTAAIILSFLSLMTFA
DFLADHLLRDDWGGIGLDGMNFVEAVAEAMEDLRFDNHDREEPPPERREH
ALDNGGGGGGGGGGGGEGGARAAFAARGDPNAFDDRDDSDERTDDGFSFV
EEAAVTDSYDEDSPRGANGSRVAAGREARSGPTDAATDREGRFGREATTS
GGRCVGEQEEEEDDDEESNADGEATLLDTFLDLEYRPPTPPRKGRGTGRT
AASRSGSGGATATAATAAAGRAGGERDASGVVEPSRPRRALEAPEESGEE
LVGDVSGPAAAGDAEISSPAPALAPAPRGGGRAGLGQAAEAAAAAVDDGI
AEEDHDDLDDGFLDGDLDVHMAIDELLGIRGPVTMLLRNVLWLLAFHGAY
LGLFAFFPFSIGASVVHAVSKYLDPHVLASLGNRSPHGFLRNLVQ
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