prot_S-dermatodea_contig90562.17142.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90562.17142.1
Unique Nameprot_S-dermatodea_contig90562.17142.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length73
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig90562.17142.1 vs. uniprot
Match: A0A6H5JAA8_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA8_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.030e-33
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0 
Query:    1 PPALELWITPSGRAPLPSLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLRKRFSEFLALHAGL----ARGGD 73
            P A+ L   PSGRAPLP LCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYL+KRFSEF+ALHA L    ARGG+
Sbjct:  471 PAAVTLRAMPSGRAPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHAALSGRGARGGE 547
[Close]
BLAST of mRNA_S-dermatodea_contig90562.17142.1 vs. uniprot
Match: D8LQF4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF4_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 9.000e-32
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0 
Query:   10 PSGRAPLPSLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLRKRFSEFLALHAGL----ARGGD 73
            PSGR PLP LCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYL+KRFSEF+ALHA L    ARGG+
Sbjct:    2 PSGRVPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHATLSGRGARGGE 69
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90562.17142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAA8_9PHAE1.030e-3380.52PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LQF4_ECTSI9.000e-3285.29PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 17..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90562contigS-dermatodea_contig90562:205..423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90562.17142.1mRNA_S-dermatodea_contig90562.17142.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90562 205..423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90562.17142.1 ID=prot_S-dermatodea_contig90562.17142.1|Name=mRNA_S-dermatodea_contig90562.17142.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=73bp
PPALELWITPSGRAPLPSLCCGVCGSSWETDSFGRGYRAYHLAVANNASL
VWYLRKRFSEFLALHAGLARGGD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf