prot_S-dermatodea_contig8990.17074.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8990.17074.1
Unique Nameprot_S-dermatodea_contig8990.17074.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length1101
Homology
BLAST of mRNA_S-dermatodea_contig8990.17074.1 vs. uniprot
Match: A0A6H5K1M1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 3.920e-147
Identity = 432/1171 (36.89%), Postives = 558/1171 (47.65%), Query Frame = 0
Query:    1 MIATLQRGHVKLSSPRLRPRLYLHPGDKGYVGKEPATNGEESYADSRDVVPESERQVRRTPSGNRYAKENKRGSR-------TAFQKKTHSEQRAREM--RAISHELAPFVKRKIPTLGDPSTSAGLSKARLARTMRLVENTFSFTRGHDPKTAWQSKGKSRVSFR-ATIGAGTPSTSAAPVAGLDPPKGIL----------ADPMNGPAGK-SWSTAPTRAPRPDEPNPLSQKQVFSASGTQGRRAAMRLGMVDEVTRGKNGNINPTEIASTARLRGALGVGVVGEAAAKVIVARMMRNWRQGQVAREQASGGKSGTTHDTSGAIVQ-------PRAGASKPILPSKHACGGRSDARSAPGGARGARGGDRDTKATTPRATGAGRRKRPGTSGGVPQEGLFKTALSSMAKDRLCTGLKEIKTNPADLLRCGFAEIEPTRHGSSAFGCHLIKGRVEQKAGNVRRALGHYQRAVASEPENAEALFCKAVASAQLGEFFDALKDLSAAINFTLAEQQRRMHKNISNSRGGRGLN----SGAAS---TAGTEGG------GGG------VDLGPLYFNRAVIHVCLGDDGSALDDLDRAVAKETRNIRRDRGWGYRSNRALILRRVGDFRGAQQDYSRIRALQALQQANEERNDIKDAGGKAKSCFTASVKR-PTTSTCATRRRQSAVAKVDVDK----------GGHFMPSAGPSTRDKHSELHTAEGLAGTRTEAASTTAASVHNQK---PRGGKRTSPSLPVKNKLDRRQLPKPVGNSEDTRKNAEHRGRVQPLENAVCGSGGGGPGGEVGRVEHHSAVPVENDEPTAKHVRIEQEVQVSGGG------KHDHHLMGGSTLDALSTGARE--TLPDGATKTPQSLNPKSNGDVTAALSSLSDAASNKEVTMSSDCGETVIAIEDDSPAVDLSHRTVAVAQSQGIDTIRSFEADTREAEDRPRRTSYSDCLDGAPPTGDSTCIQASTTEWPDQARIRKLLEDNDRRQAVLQNFVSSLNHGA--RSTATGRSKARGKLSETGQNSAQCSGGGLRNVLRKGSGSGASLGEFKASVGLSAKGELFDDLFCRPSCLDEALTTEPGRRTPEQASGARCSALSHIVEVLVESPALNGLSKDTLLDVAKVVEYRVLERMAPAFLQGEKTDAMAMILSGR 1100
            ++ T++ GHVK++SP LRPRLYL+PGDKGYVG     +   +  DS D    S         G         G R       T   ++  SE++A +   R ++ + +   +  IPT G  +T AG   +  A                 P  A           R A I  G P     P  G+ PP G++               GPA + SW  A  RAPRPDE NP+ QK++F+A+GTQGRRAA R GM DEV R    N+NPTE A+T  LR ALGV V GEAAA+ ++ RM+RN +        + GG+  ++  T GA           R G  K    SK ACG R          RG   G    K     +  AG     G SGG+  EG+FKT LSSMAK RL  GL EIK+NP DLLR GFAE+EP +HGS+A GCHLIKG  EQK GN  RALGH++RAVASEPEN EALFCKAV SAQL E FDALKD SAAI+F L E  R   +    S   R  N    SG A+   T G +GG      GGG      V L  LY NRA++HVCLGDD SALDDLDRAVA++TRNI                       GAQQDYSRIRALQ L+Q   +RN I++   +     T +VK  P T + A     +  A                G    P      R   +     +G++ +     S   A++H +    P  G R++  +  +  +   + P P G+ E  R     R    PL               +G V   S +P        K + +E+    +  G      +H+     G ++ A + G     T    AT+T     PK                  ++    + CG       +D PA                         T       R T+    +D     G S+C   S+  W D  R ++L+EDN RR+A+L+    S   G   R         RG      +NS  C      + LRK +G GASLGEFKAS+GLSAKGELFDDLFCRPS LDEALTTEPGRRTPEQ        + H+VE L   PA +GL+K+ ++++   VEYR+L++M+  FLQGE+TDAM +ILSGR
Sbjct:    7 VLTTMRGGHVKITSPSLRPRLYLYPGDKGYVGG--GGSAMNANTDSHDRGERSSTGCSNGGVGGSXXXXXXXGDRDRRNQSGTELDRRVESERQAWQSKGRRVAADTSSLFRPSIPTPGSFTTPAGHGPSTTA-----------------PSAAGXXXXXXXXXRRNARIDLGFP-----PGVGVTPPGGVIRRNRTRPPKTTGTAAGPAAEGSWKAATVRAPRPDEGNPMCQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNVNPTETATTGNLRSALGVVVTGEAAARAVIGRMIRNRKAKMAKTAMSKGGEDCSSGVTVGACAHGPISKGADRGG--KTGGRSKVACGDREG--------RGGSAGVLKNKPAKGVSISAG-----GVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFAEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALRQSGASNTKRPSNWVTASGNAAGVYTHGRDGGEARTGQGGGTSGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNIT----------------------GAQQDYSRIRALQMLEQTATDRNAIQETISRPS---TPAVKDGPHTGSIALNGSPTTAAXXXXXXXXXXXXXXXXGATGAPEEKGGARRPRAVKSHGKGISSSGGGLVSDGPAAMHARAKSLPSTGARSTTVVVAEPGVGMAEKP-PAGHHEHVR-----RCTSSPLLEKTF----------LGEVGVGSVIPA-----PGKSLLLEENKTPASPGHGQRVMEHEGTAQDGGSVAAAADGPATFITRTGAATRTAGYSLPKG-----------------RQGDTHTGCGNDRATDSNDIPAPPAXXXXXXXXXXXXXXXXXXXXXXTMTT----RTTAGDKSIDA----GLSSC---SSEHWSDLFRDKRLMEDNFRRRALLRELHLSPTDGGEGRRNRYPDEDGRGGAESEKRNSGGC------DRLRKTTGKGASLGEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQ--------VVHVVEALAACPAFDGLAKEVMIEIGNAVEYRLLDKMSAVFLQGEETDAMVVILSGR 1050          
BLAST of mRNA_S-dermatodea_contig8990.17074.1 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 2.140e-143
Identity = 424/1161 (36.52%), Postives = 524/1161 (45.13%), Query Frame = 0
Query:    1 MIATLQRGHVKLSSPRLRPRLYLHPGDKGYVGKEPATNGEESYADSRDVVPESERQVRRTPSGNRYAKENKRGSR-------TAFQKKTHSEQRAREM--RAISHELAPFVKRKIPTLGDPSTSAGLSKARLARTMRLVENTFSFTRGHDPKTAWQSKGKS-RVSFRATIGAGTPSTSAAPVAGLDPPKGILADPMN------------GPAGK-SWSTAPTRAPRPDEPNPLSQKQVFSASGTQGRRAAMRLGMVDEVTRGKNGNINPTEIASTARLRGALGVGVVGEAAAKVIVARMMRNWRQGQVAREQASGGKSGTTHDTSGAIVQPRAGASKPILPSKHACGGRSDARSAPGGARGARGGDRDTKATTPRATGAGRRKRPGTSGGVPQEGLFKTALSSMAKDRLCTGLKEIKTNPADLLRCGFAEIEPTRHGSSAFGCHLIKGRVEQKAGNVRRALGHYQRAVASEPENAEALFCKAVASAQLGEFFDALKDLSAAINFTLAEQQRR--MHKNISNSRGGRGLNSGAASTAGTEGGG---------------------GGVDLGPLYFNRAVIHVCLGDDGSALDDLDRAVAKETRNIRRDRGWGYRSNRALILRRVGDFRGAQQDYSRIRALQALQQANEERNDIKDAGGKAKSCFTASVKRPTTSTCATRRRQSAVAKVDVDKGGHFMPSAGPSTRDKHSELHTAEGLAGTRTEAASTTAASVHNQKPRGGKRTSPSLPVKNKLDRRQLPKPVGNSEDTRKNAEHRGRVQPLENAVCGSGGGGPGGEVGRVEHHSAVPVENDEPTAKHVRIEQEVQVSGGGKHDHHLMGGSTLDALSTGARETLPDGATKTPQSLNPKSNGDVTAALSSLSDAASNKEVTMSSDCGETVIAIEDDSPAVDLSHRTVAVAQSQGIDTIRSFEADTREAEDRP------RRTSYSDCLDGA--PPTGDSTCIQASTTEWPDQARIRKLLEDNDRRQ-------AVLQNFVSSLNHGARSTATGRSKARGKLSETGQNSAQCSGGGLRNVLRKGSGSGASLGEFKASVGLSAKGELFDDLFCRPSCLDEALTTEPGRRTPEQASGARCSALSHIVEVLVESPALNGLSKDTLLDVAKVVEYRVLERMAPAFLQGEKTDAMAMILSGR 1100
            ++ T++ GHVK++SP LRPRLYL+ GDKGYVG   +T    +  DSRD    S         G         G R       T   ++  SE++A +   R  +   +  ++  +PT G  +TSAG                      H P  A    G   R    A IG G P     P  G+ PP   L  P N            GPA + SW  A  RAPRPDE NP+SQK++F+A+GTQGRRAA R GM DEV R    N NPTE+AST  LR ALGV V GEAAA++++ RM++N +        ++GG+ G+    +GA      G      P     GGRS A     G RG   G    K     +T AG     G SGG+  EG+FKT LSSMAK RL  GL+EIK+NP DLLR GF E+EPT+HGS+A GCHLIKG  EQ  GN  RALGH++RAVASEPEN EALFCKAV SAQL E FDALKD SAAI+F L E  R     +  SN++      S   + +G+ G                         V L  LY NRA++HVCLGDD SALDDLDRAVA++TRNI       YRSNRALILRRVGDFRGAQQDYSRIRALQ L+Q   +R+                      +T  T  R +  A  D    G    +  P+T           G AG                                             +E T    E  G  +P   AV   G G                                                     +S+G    +PDG+              V A   SL  A +                             T AV    G+ T+    A  RE   R        RTS+ +   GA  P  G S  ++ + T        R + E     Q       A      SS   G  +  TG S  +G+                          GASL EFKAS+GLSAKGELFDDLFCRPS LDEALTTEPGRRTPEQ        + H+VE L   PA +GL K+ ++++   VEYRVL++M+ AFLQGE+ DAM +ILSGR
Sbjct:  347 VLTTMRGGHVKITSPSLRPRLYLYTGDKGYVGGGGSTMN--ANTDSRDGGKRSSAGCSNGGVGGSXXXXXXXGDRDRQNQGGTEVDRRVESERQAWQSKGRTAAAGTSSSLRPSVPTPGSFTTSAG----------------------HAPTAAGHGAGSGLRAQRNARIGPGFP-----PGVGIIPPGRAL--PQNRTRPPKTTGTAVGPAAEGSWRAATVRAPRPDEGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRRDQTNANPTEMASTGNLRSALGVVVTGEAAARLVIGRMIQNRKARMAKTAMSNGGEDGSRG--AGACAY---GPISKRAPRGGLTGGRSMAAGRDRGGRGGSAGALKRKPVKGVSTSAG-----GVSGGLLGEGIFKTVLSSMAKKRLREGLQEIKSNPLDLLRRGFVEVEPTKHGSTALGCHLIKGWEEQTNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALQQRGASNTK----RPSNGVTASGSAGXXXXXXXXXXXXXXXXXXXXXXKSNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNIT------YRSNRALILRRVGDFRGAQQDYSRIRALQILEQTAADRS----------------------ATQETISRPATPAVKDGPHTGSIALNGSPTTA----------GAAGA--------------------------------------------AEATGAPEEKGGATRPW--AVKSHGKG-----------------------------------------------------ISSGGGGLVPDGSAA------------VHARARSLPSAGA---------------------------RTTTAVVAEPGVGTVEKPTAGHREHVQRCASSPLLERTSHGNVGVGAVIPTPGKSLLLEENKTPASPGHGGRSIEEHKGTAQDGGSAAAAADGPATSSTRTGTATMTTGYSLPKGRQ-------------------------GASLVEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQ--------VVHVVEALAACPAFDGLEKEVMIEIGNAVEYRVLDKMSAAFLQGEEIDAMVVILSGR 1253          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8990.17074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1M1_9PHAE3.920e-14736.89Cyclic nucleotide-binding domain-containing protei... [more]
D7FWC6_ECTSI2.140e-14336.52Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 588..608
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 429..592
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 429..592
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 452..485
e-value: 51.0
score: 8.7
coord: 418..451
e-value: 11.0
score: 14.8
coord: 563..596
e-value: 140.0
score: 5.0
coord: 523..556
e-value: 12.0
score: 14.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 521..627
e-value: 3.3E-6
score: 28.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 373..498
e-value: 3.5E-9
score: 38.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 421..593
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 1056..1100
score: 7.305
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 418..485
score: 11.113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8990contigS-dermatodea_contig8990:813..8163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8990.17074.1mRNA_S-dermatodea_contig8990.17074.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8990 813..8172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8990.17074.1 ID=prot_S-dermatodea_contig8990.17074.1|Name=mRNA_S-dermatodea_contig8990.17074.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1101bp
MIATLQRGHVKLSSPRLRPRLYLHPGDKGYVGKEPATNGEESYADSRDVV
PESERQVRRTPSGNRYAKENKRGSRTAFQKKTHSEQRAREMRAISHELAP
FVKRKIPTLGDPSTSAGLSKARLARTMRLVENTFSFTRGHDPKTAWQSKG
KSRVSFRATIGAGTPSTSAAPVAGLDPPKGILADPMNGPAGKSWSTAPTR
APRPDEPNPLSQKQVFSASGTQGRRAAMRLGMVDEVTRGKNGNINPTEIA
STARLRGALGVGVVGEAAAKVIVARMMRNWRQGQVAREQASGGKSGTTHD
TSGAIVQPRAGASKPILPSKHACGGRSDARSAPGGARGARGGDRDTKATT
PRATGAGRRKRPGTSGGVPQEGLFKTALSSMAKDRLCTGLKEIKTNPADL
LRCGFAEIEPTRHGSSAFGCHLIKGRVEQKAGNVRRALGHYQRAVASEPE
NAEALFCKAVASAQLGEFFDALKDLSAAINFTLAEQQRRMHKNISNSRGG
RGLNSGAASTAGTEGGGGGVDLGPLYFNRAVIHVCLGDDGSALDDLDRAV
AKETRNIRRDRGWGYRSNRALILRRVGDFRGAQQDYSRIRALQALQQANE
ERNDIKDAGGKAKSCFTASVKRPTTSTCATRRRQSAVAKVDVDKGGHFMP
SAGPSTRDKHSELHTAEGLAGTRTEAASTTAASVHNQKPRGGKRTSPSLP
VKNKLDRRQLPKPVGNSEDTRKNAEHRGRVQPLENAVCGSGGGGPGGEVG
RVEHHSAVPVENDEPTAKHVRIEQEVQVSGGGKHDHHLMGGSTLDALSTG
ARETLPDGATKTPQSLNPKSNGDVTAALSSLSDAASNKEVTMSSDCGETV
IAIEDDSPAVDLSHRTVAVAQSQGIDTIRSFEADTREAEDRPRRTSYSDC
LDGAPPTGDSTCIQASTTEWPDQARIRKLLEDNDRRQAVLQNFVSSLNHG
ARSTATGRSKARGKLSETGQNSAQCSGGGLRNVLRKGSGSGASLGEFKAS
VGLSAKGELFDDLFCRPSCLDEALTTEPGRRTPEQASGARCSALSHIVEV
LVESPALNGLSKDTLLDVAKVVEYRVLERMAPAFLQGEKTDAMAMILSGR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR000595cNMP-bd_dom
IPR013026TPR-contain_dom