prot_S-dermatodea_contig8983.17063.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8983.17063.1
Unique Nameprot_S-dermatodea_contig8983.17063.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length428
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8983.17063.1 vs. uniprot
Match: A0A6H5KAZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ5_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 7.240e-54
Identity = 147/352 (41.76%), Postives = 177/352 (50.28%), Query Frame = 0 
Query:   89 EADRCRASLLTGYVPPAAYTHVNVPVLMQQTSAAIVRWGDLQKTLNVASDSATANLAAQTQVRASLKRDLTNLTQLADAQTKHIQRTKMRQMQEMQQTTKAP----------AQGA--FPGGVTATPSSLAGGTTPTGSVGLTREGYGY--PSKPQPELNPPSVPVVSMRGAQMPPPSHAPNAS---------IGAVLMQHVAGGAGAGAAHGSLPAARTDNPVEEQRAEWRQSEWPSGTSSPRPPVQSTSAPPTVPPQHAMPLQHRLHDVKQQLDRTEPRNKWVVLLHAALQLPPHEGQTYEQFFRTIQGLLNTYNGAVGAEVAQALRTCLDPRVFDPMDIKRSQDRMADV 417
            +AD+  + LL+ YVPPA    VNVPVL+QQT+ AIVRW +LQK L+V SDSA+ANLAAQ  VR+SLKRDLTNL QLADAQTKH Q+ K RQMQ MQ                AQG    PGG          G     +   T E Y    P + Q                         NAS          GA+LMQ      GAG                                          APP+          +R   ++Q++DRTEP NKWVVL+ A+L+LPP +G T+E F   IQ  LN YNG VGAEVA+AL +CLDPRVFDP DIKR+Q+RMAD+
Sbjct:   59 DADQRPSPLLSDYVPPAGLALVNVPVLLQQTACAIVRWEELQKNLDVRSDSASANLAAQAHVRSSLKRDLTNLIQLADAQTKHTQKMKFRQMQAMQXXXXXXXXXXXXXXXXAQGVQPLPGGRNPARGGTGAGLDSARAGVATGEAYDEFPPKRKQVXXXXXXXXXXXXXXXXXXXXXXXXNASSYAASNSGPTGAMLMQQ-----GAGXXXXXXXXXXXXXXXX------------------------XXAPPS----------NRHEGIRQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADI 371
[Close]
BLAST of mRNA_S-dermatodea_contig8983.17063.1 vs. uniprot
Match: D8LB93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB93_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 2.450e-28
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0 
Query:  326 AMPLQHRLHDVKQQLDRTEPRNKWVVLLHAALQLPPHEGQTYEQFFRTIQGLLNTYNGAVGAEVAQALRTCLDPRVFDPMDIKRSQDRMADV 417
            A P  +R   ++Q++DRTEP NKWVVL+ A+L+LPP +G T+E F   IQ  LN YNG VGAEVA+AL +CLDPRVFDP DIKR+Q+RMAD+
Sbjct:  132 APPPSNRHEGIRQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADI 223
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8983.17063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAZ5_9PHAE7.240e-5441.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB93_ECTSI2.450e-2861.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8983contigS-dermatodea_contig8983:6260..8170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8983.17063.1mRNA_S-dermatodea_contig8983.17063.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8983 5569..8227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8983.17063.1 ID=prot_S-dermatodea_contig8983.17063.1|Name=mRNA_S-dermatodea_contig8983.17063.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=428bp
MELQRHESEQDPQQQAEGALREIDLGIEQRNQPPGQQQQQQQPQPQHQHH
HLKQPWQPQGQPEVVKHRRQQQPQQSQQPQQPQAQTRAEADRCRASLLTG
YVPPAAYTHVNVPVLMQQTSAAIVRWGDLQKTLNVASDSATANLAAQTQV
RASLKRDLTNLTQLADAQTKHIQRTKMRQMQEMQQTTKAPAQGAFPGGVT
ATPSSLAGGTTPTGSVGLTREGYGYPSKPQPELNPPSVPVVSMRGAQMPP
PSHAPNASIGAVLMQHVAGGAGAGAAHGSLPAARTDNPVEEQRAEWRQSE
WPSGTSSPRPPVQSTSAPPTVPPQHAMPLQHRLHDVKQQLDRTEPRNKWV
VLLHAALQLPPHEGQTYEQFFRTIQGLLNTYNGAVGAEVAQALRTCLDPR
VFDPMDIKRSQDRMADVYYQWARHGQR*
back to top