prot_S-dermatodea_contig8954.17038.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8954.17038.1
Unique Nameprot_S-dermatodea_contig8954.17038.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length110
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8954.17038.1 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.230e-13
Identity = 80/110 (72.73%), Postives = 95/110 (86.36%), Query Frame = 0 
Query:    1 AGEVARSTGKAGVAIVDKSKELNERYGVSEKVKDAAHNTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTRAGEAFEGAMDEVAKAASTKDES-DSTGSTRK 109
            AG+VARSTG+AG+A+V+K KE+N +YGV++KVK AAH+T+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RAGEAF GAMD V  A S KD+  D  G+T+K
Sbjct:   58 AGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAAHSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAGEAFGGAMDSVTNAVSKKDDGQDGWGATKK 167
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8954.17038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN9_ECTSI3.230e-1372.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8954contigS-dermatodea_contig8954:6437..8326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8954.17038.1mRNA_S-dermatodea_contig8954.17038.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8954 5435..8326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8954.17038.1 ID=prot_S-dermatodea_contig8954.17038.1|Name=mRNA_S-dermatodea_contig8954.17038.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp
AGEVARSTGKAGVAIVDKSKELNERYGVSEKVKDAAHNTYEKAKAVNEEH
GVVDKAKAGASRTWQRIREADREHNLTTRAGEAFEGAMDEVAKAASTKDE
SDSTGSTRK*
back to top