prot_S-dermatodea_contig88897.16993.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig88897.16993.1
Unique Name	prot_S-dermatodea_contig88897.16993.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	209

Homology

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BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A7S6U9Y1_9STRA (ATP synthase subunit beta, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6U9Y1_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 4.840e-136
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF
Sbjct:  211 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 419

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BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A0H5B5S8_9PHAE (ATP synthase subunit beta (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A0H5B5S8_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 1.290e-132
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGID LSE+DRLVV RARKIERFLSQPF
Sbjct:   67 LLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDXLSEEDRLVVDRARKIERFLSQPF 275

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BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A0H5BN74_9PHAE (ATP synthase subunit beta (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0H5BN74_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 3.200e-132
Identity = 200/209 (95.69%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPF
Sbjct:   73 LLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPF 281

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A0H5B5R8_9PHAE (ATP synthase subunit beta (Fragment) n=10 Tax=Stramenopiles TaxID=33634 RepID=A0A0H5B5R8_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 4.460e-132
Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPF
Sbjct:  134 LLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPF 342

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A0H5BB45_9PHAE (ATP synthase subunit beta (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0H5BB45_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 7.110e-132
Identity = 199/209 (95.22%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERI STTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPF
Sbjct:   95 LLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERINSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPF 303

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A7T7DA84_9STRA (ATP synthase subunit beta (Fragment) n=3 Tax=Aurearena TaxID=517359 RepID=A0A7T7DA84_9STRA)

HSP 1 Score: 384 bits (985), Expect = 8.220e-132
Identity = 199/209 (95.22%), Postives = 205/209 (98.09%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+NKQDVLLF+DNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ SIVG EHY+TAQ VK+TLQRYKELQDIIAILGIDELSE+DRLVVARARK+ERFLSQPF
Sbjct:  146 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQSSIVGAEHYQTAQSVKQTLQRYKELQDIIAILGIDELSEEDRLVVARARKVERFLSQPF 354

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A2Z5XCN2_9PHAE (ATP synthase subunit beta (Fragment) n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A2Z5XCN2_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 9.610e-132
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPF
Sbjct:  137 LLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPF 345

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A7T7IGV2_9STRA (ATP synthase subunit beta (Fragment) n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7IGV2_9STRA)

HSP 1 Score: 383 bits (983), Expect = 1.600e-131
Identity = 200/209 (95.69%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L ESKVALVYGQMNEPPGARMRVGL+ALTMAEYFRD+NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ SIVG EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVVARARKIERFLSQPF
Sbjct:  146 LPESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQQSIVGSEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVARARKIERFLSQPF 354

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: A0A7T7DA94_9STRA (ATP synthase subunit beta (Fragment) n=2 Tax=Tetrasporopsidaceae TaxID=2797588 RepID=A0A7T7DA94_9STRA)

HSP 1 Score: 384 bits (987), Expect = 1.350e-130
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR LAAKGIYPAVDPLDSTSTMLQPSIVGEEHY+TAQ VKETLQRYKELQDIIAILGIDELSEDDRL+VARARK+ERFLSQPF
Sbjct:  210 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERITSTKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQAVKETLQRYKELQDIIAILGIDELSEDDRLLVARARKVERFLSQPF 418

[Close]

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Match: ATPB_FUCVE (ATP synthase subunit beta, chloroplastic n=207 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_FUCVE)

HSP 1 Score: 384 bits (986), Expect = 1.970e-130
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 0

Query:    1 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPF 209
            L ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPF
Sbjct:  211 LLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPF 419

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig88897.16993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S6U9Y1_9STRA	4.840e-136	100.00	ATP synthase subunit beta, chloroplastic n=2 Tax=S...	[more]
A0A0H5B5S8_9PHAE	1.290e-132	96.17	ATP synthase subunit beta (Fragment) n=2 Tax=Ochro...	[more]
A0A0H5BN74_9PHAE	3.200e-132	95.69	ATP synthase subunit beta (Fragment) n=3 Tax=Eukar...	[more]
A0A0H5B5R8_9PHAE	4.460e-132	96.17	ATP synthase subunit beta (Fragment) n=10 Tax=Stra...	[more]
A0A0H5BB45_9PHAE	7.110e-132	95.22	ATP synthase subunit beta (Fragment) n=3 Tax=Eukar...	[more]
A0A7T7DA84_9STRA	8.220e-132	95.22	ATP synthase subunit beta (Fragment) n=3 Tax=Aurea...	[more]
A0A2Z5XCN2_9PHAE	9.610e-132	96.17	ATP synthase subunit beta (Fragment) n=5 Tax=Ochro...	[more]
A0A7T7IGV2_9STRA	1.600e-131	95.69	ATP synthase subunit beta (Fragment) n=5 Tax=Ochro...	[more]
A0A7T7DA94_9STRA	1.350e-130	96.17	ATP synthase subunit beta (Fragment) n=2 Tax=Tetra...	[more]
ATPB_FUCVE	1.970e-130	96.17	ATP synthase subunit beta, chloroplastic n=207 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	GENE3D	1.10.1140.10		coord: 149..209 e-value: 2.4E-28 score: 100.2
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 5..146 e-value: 1.6E-44 score: 152.2
None	No IPR available	GENE3D	3.40.50.300		coord: 1..148 e-value: 4.3E-64 score: 218.4
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 2..209
None	No IPR available	PANTHER	PTHR15184:SF8	ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC	coord: 2..209
None	No IPR available	SUPERFAMILY	47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 149..209
IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	PROSITE	PS00152	ATPASE_ALPHA_BETA	coord: 137..146
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig88897	contig	S-dermatodea_contig88897:3..629 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig88897.16993.1	mRNA_S-dermatodea_contig88897.16993.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig88897 3..629 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig88897.16993.1 ID=prot_S-dermatodea_contig88897.16993.1|Name=mRNA_S-dermatodea_contig88897.16993.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=209bp
LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIF
RFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQA
VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ
PSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARK
IERFLSQPF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024034	ATPase_F1/V1_b/a_C
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR020003	ATPase_a/bsu_AS
IPR027417	P-loop_NTPase