prot_S-dermatodea_contig888.16989.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig888.16989.1
Unique Nameprot_S-dermatodea_contig888.16989.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length249
Homology
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BLAST of mRNA_S-dermatodea_contig888.16989.1 vs. uniprot
Match: D7FQ88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ88_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 7.480e-77
Identity = 125/242 (51.65%), Postives = 163/242 (67.36%), Query Frame = 0 
Query:    3 LPLLSPSAEPAPKFSGH-HGLWRSCLWESNTDDHYWEKCRRNKRLGG-KAIAFAATHVHVRMLSRLDMHAFFSFVRDGITKPITDADETGGRLLAPSSRCTCRLVKAASSEESLANGMTDSIRMKTHACIGSGKRHELESTTCSKACARARNAAPRPLAHRSCLAGCRAGLNTAWDVGCTAGGHQDCVKSATARCDYHCATYRNQFPKPTIFNTCQRSCLDVVDDTCVKAKKTFVAADSLSR 242
            LP++SPSAEPAPK+  H HG  R+  W+S +D  YWEKCR N R    KA+   A  V V +L         + +R   T+P+ + +     L       T  L +AA +++S   G T+ +R+KT AC+GSGK+HELES TC+K CA+AR  APRPLAHRSCLAGCRAG+ TAWD  C  G H+DCV+ +T RCD+HCA+YRNQFPKPTIFN C RSCLDVVD TC+K+K+ F +A++  +
Sbjct:    7 LPVISPSAEPAPKYGRHQHGARRTSFWKSESDQ-YWEKCRHNTRSRQRKAVGLTAVVVVVSLL------LLAAGLRGRRTEPVVEEEGATSSLDRTGELITSSLEEAAPADDS---GNTNGLRLKTLACVGSGKKHELESKTCAKVCAKARTTAPRPLAHRSCLAGCRAGVTTAWDTACVGGRHRDCVRESTERCDFHCASYRNQFPKPTIFNQCLRSCLDVVDTTCLKSKEVFASAETFDQ 238
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig888.16989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ88_ECTSI7.480e-7751.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig888contigS-dermatodea_contig888:5321..7709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig888.16989.1mRNA_S-dermatodea_contig888.16989.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig888 5321..7709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig888.16989.1 ID=prot_S-dermatodea_contig888.16989.1|Name=mRNA_S-dermatodea_contig888.16989.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=249bp
MPLPLLSPSAEPAPKFSGHHGLWRSCLWESNTDDHYWEKCRRNKRLGGKA
IAFAATHVHVRMLSRLDMHAFFSFVRDGITKPITDADETGGRLLAPSSRC
TCRLVKAASSEESLANGMTDSIRMKTHACIGSGKRHELESTTCSKACARA
RNAAPRPLAHRSCLAGCRAGLNTAWDVGCTAGGHQDCVKSATARCDYHCA
TYRNQFPKPTIFNTCQRSCLDVVDDTCVKAKKTFVAADSLSRSLENEL*
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