prot_S-dermatodea_contig8819.16953.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8819.16953.1
Unique Nameprot_S-dermatodea_contig8819.16953.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length393
Homology
BLAST of mRNA_S-dermatodea_contig8819.16953.1 vs. uniprot
Match: D7G9D4_ECTSI (Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 5.310e-182
Identity = 263/393 (66.92%), Postives = 311/393 (79.13%), Query Frame = 0
Query:    1 MLCYVATTYGNKTAVSVEEEIMAYQTEARIVFNTGQAPDEQYFAFSPPAEILGYENYYKTVRQLGMPETSDASVPNQNMLFIHSATELANKTTLIQPFMDKAYCKGWGTMYITDDLFDGGNPWDDPPTFWEQLLLASKNIPSVASCGNDGLKVLVPLLGSDPADIDAIIATADPGDYGDRITVAMDVEITTTAESTTRAAAVRDAGAKVLCYIESDKYGNNMALLEDVVTTFTYFPLNEICAGFFFGAFNLVSAIEDMAGLQSLYATTQKTFLQATVVFAPEVQDTTEIDFSXXXXXXXXXXXXXXXXXXFDDGELSDDWDSGSDFFFPWEDVMIPPDVVALAEALVLGLDTGSTTGDIIVADTLDGKSVVPTSCGAAEHTAALVVGNMGTPD 393
            MLCYVATTYGNKT  SVEEEI AYQ+EAR+VFNTGQA DEQYF+FSPPAE+LGYENY+K VRQLG+PETSD S P QNML +HSATELA K  LIQPF+DKAYCKGWGT+Y+TDDLFD GNPWD+PPTFW   + AS+NIP+V SCG+ GLK++ PLLG+D AD +AI+ATADPGDYGDRI VAM+VEIT T EST RAAAVRDAGAKVLCYIE+DKYGN++A LE+VV T+T+FPLNEIC GFFFGAFN++ AIEDM G+QSLY  TQKTFLQ TVVFAPEVQD ++   S                   DD   +++WDS ++F  PWEDVM   D+VALAE+L +GL  G+T G+I+VA+ +DG SV+P +    E TAALV G  G P+
Sbjct:   96 MLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDE------DDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPE 482          
BLAST of mRNA_S-dermatodea_contig8819.16953.1 vs. uniprot
Match: D8LFB3_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB3_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.160e-21
Identity = 81/290 (27.93%), Postives = 140/290 (48.28%), Query Frame = 0
Query:   30 IVFNTGQAPDEQYFAFSPPAEILGYENYYKTVRQLGMPETSDASV-PNQNMLFIHSATELANKTT-----LIQPFMDKAYCKGWGTMYITDDLFD-----GGNPWDDPPTFWEQLLLASKNIPSVA--SCGNDGLKVLVP--LLGSDPAD-IDAIIATADPGDYGDR-ITVAMDVEITTTAESTTRAAAVRDAGAKVLCYIESDKYGNNMALLEDVVTTFTYFPL-NEICAGFFFGAFNLVSAIEDMAGLQSLYATTQKTFLQATVVFA---PEVQ-------DTTEIDF 291
            + FN G   D  YFAFS    ++ YEN+Y+ ++ +GMP T  + + P+Q+ L +H+ +   +  T     L++  + +A C GWG +Y+T D  D     GGNPW+    +W+ L+ A K  P++   SC    + ++VP  L G    D +D ++      ++ +  +TV +D         T  A  +RDAGA+VLCY + + Y +   L+ ++ +         E+C G +   ++  +   +   +  LY T Q    +  +V     P+VQ       D TE+ F
Sbjct:  179 VTFNPGGGVDPAYFAFSGNPTVMSYENFYRVMKNVGMPRTPSSVLDPSQHALAVHTTSPDLDGNTEETRALVEAIVQEAACSGWGKIYLTSDSQDPGSDDGGNPWNVLTNYWDTLVEAVKAYPTLPPPSCSGPEMALMVPVWLAGEALEDAVDDVLGVVTKSNFLEGGVTVVLDARDGDGTNPT--ATQLRDAGARVLCYFDFNSYTDVYDLIGELTSADPPAAFATEVCGGLYVDNYSEFTLSAEQ-NIYDLYITVQNVIPRGMLVIDYEDPDVQLFDLYAKDWTEVSF 465          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8819.16953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9D4_ECTSI5.310e-18266.92Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D8LFB3_ECTSI1.160e-2127.93Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8819contigS-dermatodea_contig8819:1307..8911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8819.16953.1mRNA_S-dermatodea_contig8819.16953.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8819 1307..8914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8819.16953.1 ID=prot_S-dermatodea_contig8819.16953.1|Name=mRNA_S-dermatodea_contig8819.16953.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=393bp
MLCYVATTYGNKTAVSVEEEIMAYQTEARIVFNTGQAPDEQYFAFSPPAE
ILGYENYYKTVRQLGMPETSDASVPNQNMLFIHSATELANKTTLIQPFMD
KAYCKGWGTMYITDDLFDGGNPWDDPPTFWEQLLLASKNIPSVASCGNDG
LKVLVPLLGSDPADIDAIIATADPGDYGDRITVAMDVEITTTAESTTRAA
AVRDAGAKVLCYIESDKYGNNMALLEDVVTTFTYFPLNEICAGFFFGAFN
LVSAIEDMAGLQSLYATTQKTFLQATVVFAPEVQDTTEIDFSFGFSYSYS
YSYSYDYDYNFDDGELSDDWDSGSDFFFPWEDVMIPPDVVALAEALVLGL
DTGSTTGDIIVADTLDGKSVVPTSCGAAEHTAALVVGNMGTPD
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