prot_S-dermatodea_contig88118.16950.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig88118.16950.1
Unique Nameprot_S-dermatodea_contig88118.16950.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length137
Homology
BLAST of mRNA_S-dermatodea_contig88118.16950.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.990e-19
Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 0
Query:   10 GVDRYRNARGTNDLEGHHKRMRSKL-SWCVSPEVAHFALLEFKYRWNLARSISNRGLDASIGGFDDQPLIEGIQK--INWLLFGKATYPDWVLTGAFADTGERNGFVKSELLEGGGDEHPITSAADSE 134
            G+  YR  RGTND+EG+H+ +R+ L S+C SP +A   LLEF YRWNL   I NRGL A++GG  +Q L+E IQ+   +W       +P+W       DTGER G  +S  L GG  +  +   AD++
Sbjct:  646 GLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDS-SHPVFPEWPAAIDSVDTGERFGLERS--LWGGERDGEVWGIADND 770          
BLAST of mRNA_S-dermatodea_contig88118.16950.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.830e-14
Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 0
Query:   13 RYRNARGTNDLEGHHKRMRSKLSW-CVSPEVAHFALLEFKYRWNLARSISNRGLDASIGGFDDQPLIEGIQKIN--WLLFGKATYPD------WVLTGAFADTGERNGFVKSEL 117
            R  NA  +  + G+H+ +++ L++ C SPEV H  L+EF +RWN++R++ NRG+ A IG F  Q +I+ IQ++   W       YPD      WV    F D+GER     S L
Sbjct:  732 RLYNASHSACVAGYHRYLKTLLAYFCASPEVCHTVLMEFNHRWNISRTVENRGMSAEIGRFSHQYMIDHIQRVTAEW-------YPDQPLFSGWVAPADFEDSGERTNLAASVL 838          
BLAST of mRNA_S-dermatodea_contig88118.16950.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.380e-13
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:   10 GVDRYRNARGTNDLEGHHKRMRSKL-SWCVSPEVAHFALLEFKYRWNLARSISNRGLDASIGGFDDQPLIEGIQK 83
            G+  YR  RGTND+EG+H+ +R+ L S+C SP +A   LLEF +RWNL   + NRGL A +G   +Q L+E IQ+
Sbjct:  690 GLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQR 764          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig88118.16950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRJ6_9PHAE3.990e-1942.973'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JQG2_9PHAE3.830e-1437.723'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI2.380e-1349.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig88118contigS-dermatodea_contig88118:31..601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig88118.16950.1mRNA_S-dermatodea_contig88118.16950.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig88118 31..601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig88118.16950.1 ID=prot_S-dermatodea_contig88118.16950.1|Name=mRNA_S-dermatodea_contig88118.16950.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=137bp
SQAGKDPETGVDRYRNARGTNDLEGHHKRMRSKLSWCVSPEVAHFALLEF
KYRWNLARSISNRGLDASIGGFDDQPLIEGIQKINWLLFGKATYPDWVLT
GAFADTGERNGFVKSELLEGGGDEHPITSAADSEEKD
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