prot_S-dermatodea_contig88088.16945.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig88088.16945.1
Unique Nameprot_S-dermatodea_contig88088.16945.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length95
Homology
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BLAST of mRNA_S-dermatodea_contig88088.16945.1 vs. uniprot
Match: A0A6H5JN45_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN45_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.190e-16
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 0 
Query:    9 PRLKNLNFSGSEGSWPMFRDQ--------QLKSALLDVRDMNVHESTDDQLLAEGFTHSEVAKSRELWVQLINSISDDTTKSMVYSCKGPAKAWR 95
            PRLK LNF G E +WPMF+++         +  AL D RD+ V    D+ ++ +G    E++  R+LW  L  +ISD+TTK MV+ CKGP+ AWR
Sbjct:  139 PRLKQLNFDGHEKNWPMFQNEFTTQVQTCGMTRALTDSRDIVVQGVDDEGMVGQGVKFDEISMYRDLWGMLTGAISDNTTKMMVFGCKGPSAAWR 233
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig88088.16945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN45_9PHAE1.190e-1643.16CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig88088contigS-dermatodea_contig88088:200..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig88088.16945.1mRNA_S-dermatodea_contig88088.16945.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig88088 200..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig88088.16945.1 ID=prot_S-dermatodea_contig88088.16945.1|Name=mRNA_S-dermatodea_contig88088.16945.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=95bp
AVSISSSRPRLKNLNFSGSEGSWPMFRDQQLKSALLDVRDMNVHESTDDQ
LLAEGFTHSEVAKSRELWVQLINSISDDTTKSMVYSCKGPAKAWR
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