prot_S-dermatodea_contig88011.16941.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig88011.16941.1
Unique Nameprot_S-dermatodea_contig88011.16941.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length38
Homology
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: D7G3G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G6_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 8.900e-15
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV 33
            SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV
Sbjct:  256 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV 288          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: D6PJ98_9ZZZZ (GF13915 n=2 Tax=environmental samples TaxID=151659 RepID=D6PJ98_9ZZZZ)

HSP 1 Score: 58.5 bits (140), Expect = 3.040e-9
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK 37
            SF  +SPNG+Y+L GTLDD LRLW + + ++CVKTY+
Sbjct:   96 SFVKYSPNGRYILVGTLDDRLRLWNVSNPSRCVKTYQ 132          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: A0A367IQ57_RHIST (WD repeat-containing protein 5 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IQ57_RHIST)

HSP 1 Score: 54.3 bits (129), Expect = 4.500e-8
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK 37
            SF  FSPNGKY+LA TLD++LRLW   H  KC+KTY+
Sbjct:   23 SFVKFSPNGKYILASTLDNTLRLWNY-HTGKCLKTYR 58          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: A0A7S3Y1M0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1M0_HETAK)

HSP 1 Score: 55.1 bits (131), Expect = 9.440e-8
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK 37
            S+  F+PNGK++LA TLD ++RLWQ  + +KCVKTY+
Sbjct:  125 SYVRFAPNGKFLLASTLDSTMRLWQTSNPSKCVKTYR 161          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: UPI000644996E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644996E)

HSP 1 Score: 54.3 bits (129), Expect = 1.860e-7
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTY 36
            S+S+FSPNGKYVLAGTLD  LRLW    D K +KTY
Sbjct:  222 SYSSFSPNGKYVLAGTLDSKLRLWNYS-DNKVMKTY 256          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: B7GA07_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA07_PHATC)

HSP 1 Score: 53.1 bits (126), Expect = 4.850e-7
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGH--DTKCVKTYK 37
            S  T+SPNGKYVLAGTLD  LRLW +     +KC KTY+
Sbjct:  245 SHITYSPNGKYVLAGTLDSMLRLWPVNRIGSSKCAKTYQ 283          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: A0A433CX85_9FUNG (Putative WD-repeat protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CX85_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 8.370e-7
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK 37
            SF  FSPNGKY+LA T D+++RLW   H  KC+KTYK
Sbjct:  141 SFVKFSPNGKYILASTQDNTIRLWNY-HTGKCLKTYK 176          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: A0A1E7FCC1_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCC1_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 8.910e-7
Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLW--QIGHDTKCVKTY 36
            S  T+SPNGKYVLAGTLD +LRLW   +    KC KTY
Sbjct:  201 SHVTYSPNGKYVLAGTLDSALRLWPMSVSGKAKCAKTY 238          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: A0A6G1GDU0_9PEZI (WD40 repeat-like protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1GDU0_9PEZI)

HSP 1 Score: 52.4 bits (124), Expect = 9.070e-7
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    5 FSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK 37
            FSPNGK+VLA TLD S+RLW  G   +C+KTY+
Sbjct:  342 FSPNGKFVLAWTLDSSIRLWDYGERRRCLKTYQ 374          
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Match: A0A7S2AWI0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWI0_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.230e-6
Identity = 17/37 (45.95%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK 37
            S+  +SPNG+++L  TLDD++RLW   + ++C+KTY+
Sbjct:  217 SYVKYSPNGRFILVSTLDDTIRLWNASNPSRCIKTYR 253          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig88011.16941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3G6_ECTSI8.900e-15100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D6PJ98_9ZZZZ3.040e-959.46GF13915 n=2 Tax=environmental samples TaxID=151659... [more]
A0A367IQ57_RHIST4.500e-864.86WD repeat-containing protein 5 (Fragment) n=1 Tax=... [more]
A0A7S3Y1M0_HETAK9.440e-856.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI000644996E1.860e-769.44hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
B7GA07_PHATC4.850e-761.54Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A433CX85_9FUNG8.370e-762.16Putative WD-repeat protein n=1 Tax=Jimgerdemannia ... [more]
A0A1E7FCC1_9STRA8.910e-763.16WD40 repeat-like protein n=1 Tax=Fragilariopsis cy... [more]
A0A6G1GDU0_9PEZI9.070e-763.64WD40 repeat-like protein n=1 Tax=Eremomyces bilate... [more]
A0A7S2AWI0_9STRA1.230e-645.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..37
e-value: 6.5E-7
score: 30.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..26
score: 10.174
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..34
score: 9.362
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 4..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig88011contigS-dermatodea_contig88011:25..138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig88011.16941.1mRNA_S-dermatodea_contig88011.16941.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig88011 25..138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig88011.16941.1 ID=prot_S-dermatodea_contig88011.16941.1|Name=mRNA_S-dermatodea_contig88011.16941.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=38bp
SFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKTYK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam