prot_S-dermatodea_contig87997.16934.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87997.16934.1
Unique Nameprot_S-dermatodea_contig87997.16934.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length43
Homology
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.350e-18
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQGRVC++KESFGFVRCMDRPGDLFF LTEAP N+ VGDEVDF
Sbjct:  159 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDF 201          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 3.360e-18
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQGRVC++KESFGFVRCMDRPGDLFF LTEAP N+ VGDEVDF
Sbjct:  160 EQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDF 202          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: A0A5D6XH35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH35_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.070e-11
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQG V A+KESFGFV CMDR GDLFF +TEAP +V++ DEV+F
Sbjct:  149 EQGVVIAIKESFGFVSCMDRDGDLFFHITEAPVDVQLHDEVEF 191          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: A0A7S2SQY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.450e-11
Identity = 26/43 (60.47%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            E G+V ++KE FGF+RC+ RPGDLFF ++EAP +++VGDEV+F
Sbjct:   27 ECGKVKSLKEKFGFIRCVGRPGDLFFHISEAPRDIEVGDEVEF 69          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: K3WP78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP78_GLOUD)

HSP 1 Score: 62.4 bits (150), Expect = 3.330e-10
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            E+G V ++KESFGFV C+DR GDLFF +TEAP +V++ DEV+F
Sbjct:  174 EKGIVVSIKESFGFVSCVDREGDLFFHITEAPVDVQLQDEVEF 216          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: A0A3F2RIS8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIS8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.500e-10
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQG V ++K+SFGFV CM+R GDLFF ++EAP +V++ DEV+F
Sbjct:  186 EQGFVVSIKDSFGFVSCMEREGDLFFHISEAPVDVQLQDEVEF 228          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.500e-10
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            E+G V ++KE+FGFV CM+R GDLFF +TEAP +V++ DEV+F
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEF 335          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: A0A3M6V819_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V819_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.160e-9
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQG V ++KE+FGFV CM+R GDLFF ++EAP  V++ DEV+F
Sbjct:  204 EQGFVVSIKENFGFVSCMERDGDLFFHISEAPVGVQLQDEVEF 246          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: D0NFB4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFB4_PHYIT)

HSP 1 Score: 60.8 bits (146), Expect = 1.160e-9
Identity = 25/43 (58.14%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQG + ++KE+FGFV CM+R GDLFF ++EAP +V++ DEV+F
Sbjct:  180 EQGFIVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEF 222          
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Match: W2QJD1_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QJD1_PHYPN)

HSP 1 Score: 60.8 bits (146), Expect = 1.160e-9
Identity = 25/43 (58.14%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF 43
            EQG + ++KE+FGFV CM+R GDLFF ++EAP +V++ DEV+F
Sbjct:  169 EQGFIVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEF 211          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87997.16934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE3.350e-1886.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP6_ECTSI3.360e-1886.05CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A5D6XH35_9STRA1.070e-1169.77Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A7S2SQY9_9STRA4.450e-1160.47Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K3WP78_GLOUD3.330e-1062.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3F2RIS8_9STRA8.500e-1060.47Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A662X4D1_9STRA8.500e-1060.47Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6V819_9STRA1.160e-960.47Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
D0NFB4_PHYIT1.160e-958.14Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W2QJD1_PHYPN1.160e-958.14Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..43
e-value: 2.4E-13
score: 51.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87997contigS-dermatodea_contig87997:412..540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87997.16934.1mRNA_S-dermatodea_contig87997.16934.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87997 412..540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87997.16934.1 ID=prot_S-dermatodea_contig87997.16934.1|Name=mRNA_S-dermatodea_contig87997.16934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=43bp
EQGRVCAVKESFGFVRCMDRPGDLFFRLTEAPANVKVGDEVDF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold