prot_S-dermatodea_contig8779.16924.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8779.16924.1
Unique Nameprot_S-dermatodea_contig8779.16924.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length412
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8779.16924.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 2.860e-58
Identity = 123/372 (33.06%), Postives = 188/372 (50.54%), Query Frame = 0 
Query:   60 GATVSRK-EEEKCPLCEHMFTKLENTGVSGKWTRDVNIQERGEPKSGTGFMFDWGAGALDHVCQYLKEKFGDESC----------RMEIGIG-ELAASKLANRTMIFEPSL--------ATENARCPCDNVERVSITVSKHEKHMLPVSDDCAYHYPRGIETGERHEHQIKSVCTFADGTPIMNYEDLRRCLQEASCTLAENGWLQMAVFRDPRPMAVSAYYHLVRHTTLKGPPENDDAMEAFVVGVLPVMCQWVAVRYVLFGDLMSSQSRSFWYHDALMFPTVWHDRWLGLAGLLPPVSVVEDAITDALEGESYFDVKGRDEHPGAESEVVAGEEMRRFEDEVSPKLLKEAEKVLRTWLPLALLVKIGVPA 411
            G+T  RK + ++CP CE MF KL          + V +Q RGEPKSGT FMF+W   AL   C+ L   +G+ +C          R +  +  E A   +     +F+P+             + CPC  V++VSI VS   KH LPV   C + +   +    +        CT  +G  + NY D   CLQ+  C + ++  +QM + RDPR +AVS+++HL  H         D+++++FV+ +LP +C ++ +RY++  + +  ++  F Y ++L  P  WH RWL   GL PP  VV  A   +L  E  F  KG D+HPG +       E R +EDE+S  + ++ E + R WLP  LL K G+ A
Sbjct:   71 GSTGLRKLQADECPPCETMFGKLNGA------QQHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPENKG-------CTTVNGRRVGNYTDTVECLQQHPCRIVDDR-IQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLRREYGFAGKGVDKHPGGKEAT----EKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGIGA 424
[Close]
BLAST of mRNA_S-dermatodea_contig8779.16924.1 vs. uniprot
Match: A0A6H5KPP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP2_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 7.890e-6
Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = 0 
Query:   60 GATVSRK-EEEKCPLCEHMFTKLENTGVSGKWTRDVNIQERG-------EPKSGTGFMFDWGAGALDHVCQYLKEKFGDESC 133
            G+T  RK + ++CP CE MF KL          + V +Q RG       EPKSGTGFMF+W   AL   C+ L   +G+ +C
Sbjct:   69 GSTGLRKLQGDECPPCETMFGKLNGA------QQHVELQLRGASRIQYQEPKSGTGFMFEWAVNALMVTCEELGRLYGEGTC 144
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8779.16924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJE4_ECTSI2.860e-5833.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPP2_9PHAE7.890e-640.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..411

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8779contigS-dermatodea_contig8779:1640..4560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8779.16924.1mRNA_S-dermatodea_contig8779.16924.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8779 85..6380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8779.16924.1 ID=prot_S-dermatodea_contig8779.16924.1|Name=mRNA_S-dermatodea_contig8779.16924.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=412bp
MSTRPFPITPEPHCYAGSIFSHPRPFVALTCYSLHHKRRTPRLSQMGFHH
IVLLFFLLLGATVSRKEEEKCPLCEHMFTKLENTGVSGKWTRDVNIQERG
EPKSGTGFMFDWGAGALDHVCQYLKEKFGDESCRMEIGIGELAASKLANR
TMIFEPSLATENARCPCDNVERVSITVSKHEKHMLPVSDDCAYHYPRGIE
TGERHEHQIKSVCTFADGTPIMNYEDLRRCLQEASCTLAENGWLQMAVFR
DPRPMAVSAYYHLVRHTTLKGPPENDDAMEAFVVGVLPVMCQWVAVRYVL
FGDLMSSQSRSFWYHDALMFPTVWHDRWLGLAGLLPPVSVVEDAITDALE
GESYFDVKGRDEHPGAESEVVAGEEMRRFEDEVSPKLLKEAEKVLRTWLP
LALLVKIGVPA*
back to top