prot_S-dermatodea_contig87788.16923.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87788.16923.1
Unique Nameprot_S-dermatodea_contig87788.16923.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length47
Homology
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.880e-22
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYT VSRATGPSNVRVI
Sbjct: 1318 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTGVSRATGPSNVRVI 1364          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5KMJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.570e-22
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYT VSRATGPSNVRV+
Sbjct:  644 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTTVSRATGPSNVRVV 690          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5JCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.500e-22
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNV VI
Sbjct: 1225 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVMVI 1271          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.790e-22
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEGRLIIHQARHRHA VHWLYTAVSRATGPSNVRVI
Sbjct:  985 SCTVHAVQGRTVEGRLIIHQARHRHAGVHWLYTAVSRATGPSNVRVI 1031          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 6.530e-22
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNV VI
Sbjct: 1064 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVWVI 1110          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.220e-21
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEG+LIIHQARH HADVHWLYTAVSRATGPSNVRVI
Sbjct: 1101 SCTVHAVQGRTVEGKLIIHQARHPHADVHWLYTAVSRATGPSNVRVI 1147          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.660e-21
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEG LIIHQARHRHADVHWLYTAVSRATGPS+VRVI
Sbjct: 1255 SCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSSVRVI 1301          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5KCL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCL4_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 7.910e-21
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    2 CTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            CTVHAVQGRTVEGRLIIHQARH HA+VHWLYTAVSRATGPSNVRVI
Sbjct:  640 CTVHAVQGRTVEGRLIIHQARHFHAEVHWLYTAVSRATGPSNVRVI 685          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.080e-20
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            +CTVHAVQGRTVEGRLIIHQARH HADVHWLYTAVSRATGPSNV VI
Sbjct: 1290 ACTVHAVQGRTVEGRLIIHQARHFHADVHWLYTAVSRATGPSNVMVI 1336          
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 5.120e-20
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI 47
            SCTVHAVQGRTVEGRLIIHQARH +ADV+W+YTA+SRATGPSNVRVI
Sbjct:  655 SCTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVI 701          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87788.16923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2B8_9PHAE1.880e-2297.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMJ7_9PHAE2.570e-2295.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCI8_9PHAE3.500e-2297.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LNU8_9PHAE4.790e-2297.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV89_ECTSI6.530e-2297.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTS3_9PHAE1.220e-2195.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM3_9PHAE1.660e-2195.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCL4_9PHAE7.910e-2195.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCS9_9PHAE1.080e-2093.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWL4_9PHAE5.120e-2089.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87788contigS-dermatodea_contig87788:273..413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87788.16923.1mRNA_S-dermatodea_contig87788.16923.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87788 273..413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87788.16923.1 ID=prot_S-dermatodea_contig87788.16923.1|Name=mRNA_S-dermatodea_contig87788.16923.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=47bp
SCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVRVI
back to top