prot_S-dermatodea_contig87701.16920.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87701.16920.1
Unique Nameprot_S-dermatodea_contig87701.16920.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length37
Homology
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BLAST of mRNA_S-dermatodea_contig87701.16920.1 vs. uniprot
Match: A0A6H5K160_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K160_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 8.820e-10
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:    1 MPSTEPVPTCPASLMPSEDWERDVLSTFVDLRQ 33
            MPSTEPVP CP  L+PSE+WER+VLSTFVDLRQ
Sbjct:   70 MPSTEPVPACPEYLLPSEEWEREVLSTFVDLRQ 102
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BLAST of mRNA_S-dermatodea_contig87701.16920.1 vs. uniprot
Match: D7FMN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN9_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 7.200e-9
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:    1 MPSTEPVPTCPASLMPSEDWERDVLSTFVDLRQ 33
            MPSTEPVP CP  L+PSE+WE +VLSTFVDLRQ
Sbjct:   26 MPSTEPVPACPEYLLPSEEWELEVLSTFVDLRQ 58
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87701.16920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K160_9PHAE8.820e-1081.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMN9_ECTSI7.200e-978.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035426Gemin2/Brr1PFAMPF04938SIP1coord: 1..34
e-value: 1.1E-5
score: 25.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87701contigS-dermatodea_contig87701:40..150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87701.16920.1mRNA_S-dermatodea_contig87701.16920.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87701 28..150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87701.16920.1 ID=prot_S-dermatodea_contig87701.16920.1|Name=mRNA_S-dermatodea_contig87701.16920.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=37bp
MPSTEPVPTCPASLMPSEDWERDVLSTFVDLRQVQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035426Gemin2/Brr1