prot_S-dermatodea_contig87668.16916.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87668.16916.1
Unique Nameprot_S-dermatodea_contig87668.16916.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length88
Homology
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BLAST of mRNA_S-dermatodea_contig87668.16916.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 4.080e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 VFVLPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD 88
            VFVLPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD
Sbjct: 1295 VFVLPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD 1382
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BLAST of mRNA_S-dermatodea_contig87668.16916.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.410e-44
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0 
Query:    1 VFVLPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD 88
            V VL PVGKNSRTLV SVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD
Sbjct:  168 VIVLTPVGKNSRTLVNSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD 255
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BLAST of mRNA_S-dermatodea_contig87668.16916.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 4.640e-15
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    1 VFVLPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDA 71
            +FVLPP  KNS  L KS IG+VV HAK +RT GP+AVM+VIGRRLM  HL+ NYK A ++ Q A+    DA
Sbjct: 1402 IFVLPPECKNSEALKKSDIGLVVTHAKSDRTKGPYAVMMVIGRRLMRKHLEANYKDARSQVQKAQTNLADA 1472
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87668.16916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE4.080e-46100.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KG30_9PHAE2.410e-4496.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKZ5_ECTSI4.640e-1559.15PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87668contigS-dermatodea_contig87668:191..614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87668.16916.1mRNA_S-dermatodea_contig87668.16916.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87668 190..614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87668.16916.1 ID=prot_S-dermatodea_contig87668.16916.1|Name=mRNA_S-dermatodea_contig87668.16916.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=88bp
VFVLPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHL
QENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDD
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