prot_S-dermatodea_contig8763.16914.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8763.16914.1
Unique Nameprot_S-dermatodea_contig8763.16914.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length91
Homology
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: D8LDJ3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ3_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.780e-39
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0
Query:    7 QYATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPK 84
            ++ATIL IPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPK
Sbjct:  666 KFATILQIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPK 743          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A835Z0I6_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.050e-34
Identity = 65/79 (82.28%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    7 QYATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKV 85
            +Y+ +LGIP+IYG T E+ER RILG FR+N LVNCIGLSKVGDTSIDIPEANVIIQ+SSHFGSRRQEAQRLGRILRPK 
Sbjct:  487 RYSELLGIPYIYGGTREAERQRILGLFRLNTLVNCIGLSKVGDTSIDIPEANVIIQVSSHFGSRRQEAQRLGRILRPKA 565          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A7S2V0P5_9STRA (DNA helicase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0P5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 8.230e-32
Identity = 60/82 (73.17%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    8 YATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRAEE 89
            YA +L  P+IYG T E ER ++LG FR NP VNCI +SKVGDTSID+PEANVIIQ+SSHF SRRQEAQRLGRILRPK   EE
Sbjct:   95 YARLLKKPYIYGGTSEHERQKVLGLFRTNPAVNCICISKVGDTSIDLPEANVIIQVSSHFASRRQEAQRLGRILRPKATTEE 176          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: T0L9A7_9MICR (DNA helicase n=1 Tax=Nosema apis BRL 01 TaxID=1037528 RepID=T0L9A7_9MICR)

HSP 1 Score: 110 bits (276), Expect = 1.600e-29
Identity = 58/79 (73.42%), Postives = 64/79 (81.01%), Query Frame = 0
Query:    8 YATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVR 86
            YA  LG PFIYG T ++ER RIL  F+ NPL+N I LSKVGDTSID+PEA  +IQISSHFGSRRQEAQRLGRILR K R
Sbjct:   36 YALKLGKPFIYGPTGQTERMRILKQFQTNPLINTIFLSKVGDTSIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRR 114          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A662YBE6_9STRA (DNA helicase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBE6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.200e-29
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0
Query:    8 YATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRA 87
            YAT L   +IYG T E ER R+L +FR +PLVN I +SKVGDTSID+PEANVIIQ+SSHFGSRRQEAQRLGRILRPK  A
Sbjct:   28 YATKLNKGYIYGGTGERERMRLLQSFRNSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANA 107          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A7S4A639_9STRA (DNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A639_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.240e-29
Identity = 60/81 (74.07%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    8 YATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRAE 88
            YA  L  P IYGAT ESER  +LG+FR NPLVN + LSKVGD +ID+PEANVI+Q+SSHFGSRRQEAQRLGRILRPK  AE
Sbjct:  544 YARALERPAIYGATKESERQAVLGSFRFNPLVNTVCLSKVGDVAIDLPEANVIVQVSSHFGSRRQEAQRLGRILRPKASAE 624          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A7S3A9W0_9RHOD (DNA helicase n=9 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9W0_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 6.130e-29
Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    7 QYATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRA 87
            QYA  L  PFIYG T + ER R+L  F+ N  VNCI LSKVGDTSIDIPEANV+IQ+SSHFGSRRQEAQRLGRILRPK RA
Sbjct:  583 QYAIRLNAPFIYGPTTQKERMRVLHHFQTNSEVNCILLSKVGDTSIDIPEANVLIQVSSHFGSRRQEAQRLGRILRPKPRA 663          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A7S0FGE9_9STRA (DNA helicase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FGE9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 8.760e-29
Identity = 58/77 (75.32%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    8 YATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPK 84
            YA +L  P IYG TPE ER  ILGTFR    V  I +SKVGDTSID+PEANVIIQ+SSHFGSRRQEAQRLGRILRPK
Sbjct:   17 YADMLKRPLIYGETPERERQAILGTFRSTDAVRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPK 93          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: A0A1R1PFG7_ZANCU (DNA helicase n=2 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PFG7_ZANCU)

HSP 1 Score: 114 bits (285), Expect = 1.430e-28
Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    8 YATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRAEE 89
            YA  L +P+IYG TP+ ER RIL  F+ NPL+NCI LSKVGDTSID+PEA  +IQ+SSH+GSRRQEAQRLGRILR K RA++
Sbjct:  137 YAHKLKLPYIYGGTPQQERMRILQQFQHNPLLNCIFLSKVGDTSIDLPEATCLIQVSSHYGSRRQEAQRLGRILRAKRRADD 218          
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Match: F0Y8L7_AURAN (DNA helicase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8L7_AURAN)

HSP 1 Score: 115 bits (289), Expect = 3.500e-28
Identity = 59/82 (71.95%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    7 QYATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDTSIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRAE 88
            +YAT LG P IYGAT E+ER  +LG+FR N LVN I LSKVGD +ID+PEANVI+Q+SSHFGSRRQEAQRLGRILR K  A+
Sbjct:  511 KYATALGRPAIYGATKEAERQAVLGSFRFNSLVNTICLSKVGDVAIDLPEANVIVQVSSHFGSRRQEAQRLGRILRAKPSAD 592          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8763.16914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ3_ECTSI1.780e-3996.15DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835Z0I6_9STRA3.050e-3482.28DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2V0P5_9STRA8.230e-3273.17DNA helicase n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
T0L9A7_9MICR1.600e-2973.42DNA helicase n=1 Tax=Nosema apis BRL 01 TaxID=1037... [more]
A0A662YBE6_9STRA3.200e-2973.75DNA helicase (Fragment) n=1 Tax=Nothophytophthora ... [more]
A0A7S4A639_9STRA3.240e-2974.07DNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A7S3A9W0_9RHOD6.130e-2975.31DNA helicase n=9 Tax=Rhodosorus marinus TaxID=1019... [more]
A0A7S0FGE9_9STRA8.760e-2975.32DNA helicase (Fragment) n=1 Tax=Minutocellus polym... [more]
A0A1R1PFG7_ZANCU1.430e-2869.51DNA helicase n=2 Tax=Zancudomyces culisetae TaxID=... [more]
F0Y8L7_AURAN3.500e-2871.95DNA helicase (Fragment) n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 2..84
e-value: 3.8E-4
score: 29.8
IPR032438ERCC3/RAD25/XPB helicase, C-terminal domainPFAMPF16203ERCC3_RAD25_Ccoord: 7..89
e-value: 5.5E-39
score: 133.9
NoneNo IPR availableGENE3D3.40.50.300coord: 4..91
e-value: 1.4E-21
score: 78.8
NoneNo IPR availablePANTHERPTHR11274:SF0GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPBcoord: 7..88
NoneNo IPR availablePANTHERPTHR11274RAD25/XP-B DNA REPAIR HELICASEcoord: 7..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..91
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8763contigS-dermatodea_contig8763:7413..8451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8763.16914.1mRNA_S-dermatodea_contig8763.16914.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8763 7413..8451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8763.16914.1 ID=prot_S-dermatodea_contig8763.16914.1|Name=mRNA_S-dermatodea_contig8763.16914.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=91bp
MGVLAWQYATILGIPFIYGATPESERSRILGTFRVNPLVNCIGLSKVGDT
SIDIPEANVIIQISSHFGSRRQEAQRLGRILRPKVRAEETK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR032438ERCC3_RAD25_C
IPR027417P-loop_NTPase