prot_S-dermatodea_contig87534.16897.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87534.16897.1
Unique Nameprot_S-dermatodea_contig87534.16897.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length46
Homology
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BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.180e-19
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL
Sbjct:  404 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 449
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BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.340e-17
Identity = 42/46 (91.30%), Postives = 46/46 (100.00%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            A+IIWIIGEYAERIDNADEQL+HFLETFE+ESA+VQLQLLTATVKL
Sbjct:  454 AAIIWIIGEYAERIDNADEQLDHFLETFEDESADVQLQLLTATVKL 499
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BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: D8T384_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T384_SELML)

HSP 1 Score: 75.9 bits (185), Expect = 6.840e-15
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE+A+VQLQLLTATVKL
Sbjct:  436 ASMIWIIGEYAERIDNADELLEGFLETFPEETAQVQLQLLTATVKL 481
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A6S7NGJ0_LACSI (B2-adapt-app_C domain-containing protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A6S7NGJ0_LACSI)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE A+VQLQLLTATVKL
Sbjct:  504 ASMIWIIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKL 549
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A7N0VFT3_KALFE (Beta-adaptin-like protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VFT3_KALFE)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE A+VQLQLLTATVKL
Sbjct:  446 ASMIWIIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKL 491
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: B8LNI5_PICSI (Beta-adaptin-like protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LNI5_PICSI)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE A+VQLQLLTATVKL
Sbjct:  446 ASMIWIIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKL 491
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A7N0RDG1_KALFE (Beta-adaptin-like protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RDG1_KALFE)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EESA+VQLQLLTA VKL
Sbjct:  446 ASMIWIIGEYAERIDNADELLESFLETFSEESAQVQLQLLTAIVKL 491
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A2U1QAX8_ARTAN (Beta-adaptin-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QAX8_ARTAN)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE A+VQLQLLTATVKL
Sbjct:  446 ASMIWIIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKL 491
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A2U1LHW5_ARTAN (Beta-adaptin-like protein n=3 Tax=Asteroideae TaxID=102804 RepID=A0A2U1LHW5_ARTAN)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE A+VQLQLLTATVKL
Sbjct:  446 ASMIWIIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKL 491
[Close]
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Match: A0A6S7NQJ3_LACSI (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A6S7NQJ3_LACSI)

HSP 1 Score: 75.5 bits (184), Expect = 9.340e-15
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL 46
            AS+IWIIGEYAERIDNADE LE FLETF EE A+VQLQLLTATVKL
Sbjct:  423 ASMIWIIGEYAERIDNADELLESFLETFPEEPAQVQLQLLTATVKL 468
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87534.16897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J742_9PHAE3.180e-19100.00B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A836CH70_9STRA1.340e-1791.30Coatomer protein complex, beta sub-unit n=1 Tax=Tr... [more]
D8T384_SELML6.840e-1586.96Uncharacterized protein n=4 Tax=Selaginella moelle... [more]
A0A6S7NGJ0_LACSI9.340e-1586.96B2-adapt-app_C domain-containing protein n=3 Tax=L... [more]
A0A7N0VFT3_KALFE9.340e-1586.96Beta-adaptin-like protein n=1 Tax=Kalanchoe fedtsc... [more]
B8LNI5_PICSI9.340e-1586.96Beta-adaptin-like protein n=1 Tax=Picea sitchensis... [more]
A0A7N0RDG1_KALFE9.340e-1586.96Beta-adaptin-like protein n=1 Tax=Kalanchoe fedtsc... [more]
A0A2U1QAX8_ARTAN9.340e-1586.96Beta-adaptin-like protein n=1 Tax=Artemisia annua ... [more]
A0A2U1LHW5_ARTAN9.340e-1586.96Beta-adaptin-like protein n=3 Tax=Asteroideae TaxI... [more]
A0A6S7NQJ3_LACSI9.340e-1586.96Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..34
NoneNo IPR availablePANTHERPTHR11134:SF30BETA-ADAPTIN-LIKE PROTEIN Bcoord: 1..46
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..46
e-value: 2.2E-17
score: 64.7
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 2..46
e-value: 2.3E-10
score: 39.7
IPR026739AP complex subunit betaPANTHERPTHR11134ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNITcoord: 1..46
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87534contigS-dermatodea_contig87534:399..536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87534.16897.1mRNA_S-dermatodea_contig87534.16897.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87534 399..536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87534.16897.1 ID=prot_S-dermatodea_contig87534.16897.1|Name=mRNA_S-dermatodea_contig87534.16897.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=46bp
ASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR002553Clathrin/coatomer_adapt-like_N
IPR026739AP_beta
IPR016024ARM-type_fold