prot_S-dermatodea_contig86979.16837.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86979.16837.1
Unique Nameprot_S-dermatodea_contig86979.16837.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length37
Homology
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BLAST of mRNA_S-dermatodea_contig86979.16837.1 vs. uniprot
Match: A0A6H5KVA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVA5_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.450e-15
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    1 MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY 37
            MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY
Sbjct:  164 MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY 200
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BLAST of mRNA_S-dermatodea_contig86979.16837.1 vs. uniprot
Match: D8LCC3_ECTSI (RHD3c, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC3_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.450e-15
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    1 MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY 37
            MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY
Sbjct:  113 MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY 149
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BLAST of mRNA_S-dermatodea_contig86979.16837.1 vs. uniprot
Match: R7Q455_CHOCR (GB1/RHD3-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q455_CHOCR)

HSP 1 Score: 46.6 bits (109), Expect = 9.520e-5
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:    3 ADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVR 35
            ADVI+LN+W HDVGR D   Y++L +VF EA++
Sbjct:  120 ADVILLNMWYHDVGRFDASGYALLDAVFAEAIK 152
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86979.16837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KVA5_9PHAE2.450e-15100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCC3_ECTSI2.450e-15100.00RHD3c, RHD3/Sey1 family GTPase involved in the ER-... [more]
R7Q455_CHOCR9.520e-557.58GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 3..37
e-value: 5.1E-6
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86979contigS-dermatodea_contig86979:174..284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86979.16837.1mRNA_S-dermatodea_contig86979.16837.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86979 150..284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86979.16837.1 ID=prot_S-dermatodea_contig86979.16837.1|Name=mRNA_S-dermatodea_contig86979.16837.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=37bp
MAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1