prot_S-dermatodea_contig869.16831.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig869.16831.1
Unique Nameprot_S-dermatodea_contig869.16831.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length121
Homology
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A6H5K1A9_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1A9_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 5.570e-35
Identity = 71/105 (67.62%), Postives = 78/105 (74.29%), Query Frame = 0
Query:   17 GTTTATGCTGEGYRLLSARGKSRGPQGPPLLLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSKTGR 121
            GTTT  G           RG++ G +    LLD+DI+ERF  GSGPGGQKINKVRNCVQLTH P+GVSVSCQDSREL ANRHIARKRL+EKVEF L G DSK GR
Sbjct:   35 GTTTTRG----------GRGRAGGTRPAFELLDEDIEERF--GSGPGGQKINKVRNCVQLTHLPSGVSVSCQDSRELHANRHIARKRLKEKVEFQLMGADSKVGR 127          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A836CHX6_9STRA (RF-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.950e-30
Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 0
Query:   32 LSARGKSRGPQGPPL----LLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSKTGR 121
            + AR K +G +  P     L + DI E FVKGSGPGGQKINKVR+CVQLTH PTG+ V CQD+R+L +NR IARK L EKVEFHL G DS+ GR
Sbjct:   20 VDARQKQQGRKSAPTVRLKLNEADIRESFVKGSGPGGQKINKVRSCVQLTHLPTGIQVQCQDARDLISNRAIARKMLAEKVEFHLRGKDSRIGR 113          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A7S2S280_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S280_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.610e-26
Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = 0
Query:   47 LLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSKTGR 121
            L + D++E FVKG+GPGGQKINKVRNCVQL H PTG++V+ QD R LTANR IARKRL EKV+  ++G +SK G+
Sbjct:   76 LSENDLEEAFVKGTGPGGQKINKVRNCVQLRHTPTGLTVAVQDGRSLTANRAIARKRLAEKVDLEMNGRESKLGK 150          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A507CTT3_9FUNG (RF_PROK_I domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CTT3_9FUNG)

HSP 1 Score: 97.4 bits (241), Expect = 1.380e-23
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   44 PPLLLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSK 118
            P +L ++D++ERF+KGSGPGGQKINKVRNCV+L HKPTG+ + CQ  R+LT+NR  ARK L  K++  ++G  SK
Sbjct:   29 PVMLEEQDLEERFIKGSGPGGQKINKVRNCVELAHKPTGLRIQCQRFRDLTSNRKEARKLLSLKLDDLINGQSSK 103          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A507CVG5_9FUNG (RF_PROK_I domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CVG5_9FUNG)

HSP 1 Score: 97.4 bits (241), Expect = 1.710e-23
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   44 PPLLLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSK 118
            P +L ++D++ERF+KGSGPGGQKINKVRNCV+L HKPTG+ + CQ  R+LT+NR  ARK L  K++  ++G  SK
Sbjct:   38 PVMLEEQDLEERFIKGSGPGGQKINKVRNCVELAHKPTGLRIQCQRFRDLTSNRKEARKLLSLKLDDLINGQSSK 112          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A1Y2FUL4_PROLT (RF-1 domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FUL4_PROLT)

HSP 1 Score: 97.1 bits (240), Expect = 5.160e-23
Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 0
Query:   45 PLLLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSK 118
            P + + DI+E+FV+G+GPGGQKINK     QL H P+G+ VSCQ++R L  NR IARKRLREKV+ H++GD+S+
Sbjct:   62 PEISEDDIEEKFVRGTGPGGQKINKTSIVAQLKHLPSGIQVSCQETRSLQQNRSIARKRLREKVDAHINGDESR 135          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A1R2BAU3_9CILI (RF_PROK_I domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BAU3_9CILI)

HSP 1 Score: 94.7 bits (234), Expect = 1.900e-22
Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   51 DIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSKTGR 121
            D+ E+   GSGPGGQK+NK  NCV L H PT ++V   DSR+L  NRHIA KRL EKVE+HL+GDDSK  R
Sbjct:   17 DVIEKLCSGSGPGGQKVNKSENCVNLLHVPTRITVKVHDSRDLIINRHIAWKRLTEKVEYHLNGDDSKIAR 87          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A2P4YF49_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF49_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.340e-22
Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   29 YRLLSARGKSRGPQGPPL-----LLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSK 118
            +RLLS+   S  P  P       L + ++DE FVKGSG GGQKINKVRNCV LTH PTG+ V CQ +R L  NR  ARK L +K++ H++G  SK
Sbjct:   34 FRLLSSSAPSIPPNDPKKRTEVQLRESELDESFVKGSGKGGQKINKVRNCVLLTHLPTGLQVRCQKTRSLDGNRRAARKLLLQKLDDHVNGSLSK 128          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A1U7LT14_NEOID (Putative peptide chain release factor-like protein, mitochondrial n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LT14_NEOID)

HSP 1 Score: 94.0 bits (232), Expect = 5.630e-22
Identity = 39/77 (50.65%), Postives = 59/77 (76.62%), Query Frame = 0
Query:   45 PLLLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDSKTGR 121
            P +++ +++E+F++G+GPGGQKINK   CVQL H PTG++V CQDSR    NRH+ARK L++K++   +GD+S+  R
Sbjct:   32 PKIIESELEEKFIRGTGPGGQKINKTSICVQLRHIPTGITVKCQDSRYRELNRHVARKNLQKKLDVLENGDNSRAAR 108          
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Match: A0A0H5QIS4_9EUKA (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QIS4_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 9.160e-22
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 0
Query:   42 QGPPLLLDKDIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIARKRLREKVEFHLSGDDS 117
            +G   L + D+ E+F++GSG GGQKINK  +CV L HKPTG+ V CQ++R L  NR +ARKRL +K++  L+GDDS
Sbjct:   26 KGTTTLFEDDLQEKFIRGSGNGGQKINKTSSCVHLLHKPTGMIVKCQETRSLQQNRSLARKRLAQKLDVMLNGDDS 101          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig869.16831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1A9_9PHAE5.570e-3567.62RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CHX6_9STRA1.950e-3062.77RF-1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2S280_9STRA3.610e-2665.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A507CTT3_9FUNG1.380e-2358.67RF_PROK_I domain-containing protein n=1 Tax=Synchy... [more]
A0A507CVG5_9FUNG1.710e-2358.67RF_PROK_I domain-containing protein n=1 Tax=Synchy... [more]
A0A1Y2FUL4_PROLT5.160e-2358.11RF-1 domain-domain-containing protein n=1 Tax=Prot... [more]
A0A1R2BAU3_9CILI1.900e-2261.97RF_PROK_I domain-containing protein n=1 Tax=Stento... [more]
A0A2P4YF49_9STRA3.340e-2252.63RF_PROK_I domain-containing protein n=2 Tax=Phytop... [more]
A0A1U7LT14_NEOID5.630e-2250.65Putative peptide chain release factor-like protein... [more]
A0A0H5QIS4_9EUKA9.160e-2253.95RF_PROK_I domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 16..119
e-value: 2.0E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR46203FAMILY NOT NAMEDcoord: 36..120
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 49..108
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 49..109
e-value: 9.3E-20
score: 70.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig869contigS-dermatodea_contig869:13267..16498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig869.16831.1mRNA_S-dermatodea_contig869.16831.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig869 13267..16498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig869.16831.1 ID=prot_S-dermatodea_contig869.16831.1|Name=mRNA_S-dermatodea_contig869.16831.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=121bp
MDCYGQRGHWIASKLPGTTTATGCTGEGYRLLSARGKSRGPQGPPLLLDK
DIDERFVKGSGPGGQKINKVRNCVQLTHKPTGVSVSCQDSRELTANRHIA
RKRLREKVEFHLSGDDSKTGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I