prot_S-dermatodea_contig867.16812.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig867.16812.1
Unique Nameprot_S-dermatodea_contig867.16812.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length71
Homology
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A482UXY9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UXY9_9ARCH)

HSP 1 Score: 81.3 bits (199), Expect = 1.420e-18
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0
Query:   14 LIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLG 56
            +IDDDL+RMLMTGLI+N+TITYLD+SHNKITNHGARLLSKLLG
Sbjct:    1 MIDDDLLRMLMTGLIKNTTITYLDMSHNKITNHGARLLSKLLG 43          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A7S2S000_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S000_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.270e-17
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
Query:   13 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLGGNS 59
            NLIDDDL+RMLMTGLI+N +IT+LDVSHNKITNHG RLL+KLLGG S
Sbjct:  147 NLIDDDLLRMLMTGLIKNDSITHLDVSHNKITNHGVRLLAKLLGGQS 193          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: F0YNH4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNH4_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 5.090e-15
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 DFDSSSRLLGQGNLIDDDLMRMLMTGLIR---NSTITYLDVSHNKITNHGARLLSKLLGGNSVLTTLNLA 67
            D ++ + L+ Q NLIDDDL+RMLMTGLI+   +    YL  SHNK+TNHG RLLSKLLG  SVLT LNLA
Sbjct:   87 DSENMTTLVLQSNLIDDDLLRMLMTGLIKVLFHDFSIYL--SHNKVTNHGVRLLSKLLGARSVLTNLNLA 154          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: D8LCL7_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCL7_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.140e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    8 LLGQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKIT 44
            L+ QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKIT
Sbjct:  312 LVLQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKIT 348          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A835Z8G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.530e-12
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 0
Query:   11 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLGGNS--------VLTTLNLADNQV 71
            +G L+DDDL+RML  GL R +T+T+LD+SHN+I +HGARLL++LL G           LT L+LADN +
Sbjct:  231 RGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAI 299          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A7S3GG36_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GG36_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 2.010e-11
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:   13 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLG-GNSVLTTLNLADNQV 71
            NL+DDD +R+L TGL  N TIT LD+SHNKI + G R L+K+L     VL+ LNLADNQV
Sbjct:   75 NLLDDDKVRILATGLKDNGTITALDLSHNKIADRGTRALAKILSPATCVLSHLNLADNQV 134          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A7S3LUM3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LUM3_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 3.420e-11
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:   13 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLG-GNSVLTTLNLADNQV 71
            NL+DDD +R+L TGL  N TIT LD+SHNKI + G R L+K+L     VL+ LNLADNQV
Sbjct:  212 NLLDDDKVRILATGLKDNGTITALDLSHNKIADRGTRALAKILSPATCVLSHLNLADNQV 271          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A7S3GGA2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GGA2_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 3.420e-11
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:   13 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLG-GNSVLTTLNLADNQV 71
            NL+DDD +R+L TGL  N TIT LD+SHNKI + G R L+K+L     VL+ LNLADNQV
Sbjct:  212 NLLDDDKVRILATGLKDNGTITALDLSHNKIADRGTRALAKILSPATCVLSHLNLADNQV 271          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: J9IB95_9SPIT (Flagellar associated protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IB95_9SPIT)

HSP 1 Score: 55.5 bits (132), Expect = 3.060e-7
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0
Query:   12 GNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSK 53
            GNLIDDDL+ +L+ GL+ N TI+ LD SHNKI+N GAR ++K
Sbjct:  254 GNLIDDDLISILIKGLMLNKTISQLDFSHNKISNSGARKIAK 295          
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Match: A0A8J8NDT2_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NDT2_HALGN)

HSP 1 Score: 54.7 bits (130), Expect = 5.720e-7
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   12 GNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLL 51
            GNLIDDDL+ +L+ GL+ N TI+ LD+SHNKI+N GAR L
Sbjct:  247 GNLIDDDLISILIKGLMLNKTISQLDLSHNKISNSGARKL 286          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig867.16812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A482UXY9_9ARCH1.420e-1888.37Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2S000_9STRA5.270e-1782.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YNH4_AURAN5.090e-1562.86Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
D8LCL7_ECTSI1.140e-1294.59Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A835Z8G8_9STRA1.530e-1252.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3GG36_9EUKA2.010e-1160.00Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S3LUM3_9EUKA3.420e-1160.00Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S3GGA2_9EUKA3.420e-1160.00Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
J9IB95_9SPIT3.060e-761.90Flagellar associated protein n=1 Tax=Oxytricha tri... [more]
A0A8J8NDT2_HALGN5.720e-765.00Uncharacterized protein n=1 Tax=Halteria grandinel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 30..52
e-value: 1.9E-5
score: 24.3
coord: 58..71
e-value: 0.2
score: 11.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 5..71
e-value: 2.1E-13
score: 51.7
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig867contigS-dermatodea_contig867:23656..24708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig867.16812.1mRNA_S-dermatodea_contig867.16812.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig867 23656..24708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig867.16812.1 ID=prot_S-dermatodea_contig867.16812.1|Name=mRNA_S-dermatodea_contig867.16812.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=71bp
DFDSSSRLLGQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARL
LSKLLGGNSVLTTLNLADNQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf