prot_S-dermatodea_contig8422.16590.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8422.16590.1
Unique Nameprot_S-dermatodea_contig8422.16590.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length146
Homology
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BLAST of mRNA_S-dermatodea_contig8422.16590.1 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 4.300e-6
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   85 AEDAALAYDRDVIGGDGLAYGDGRAQ--PERGEDFLRGVLPAEACDSCQVTDPGGSAVNSPRGP 146
            A  AALAYD+DV+GGDGL  GDG  +  P+  +  L   L     DSC V+D GG+AV SP+GP
Sbjct: 1277 AAGAALAYDQDVLGGDGLG-GDGEEEEEPDTVDGVLGKFLATGDYDSCHVSDAGGAAVYSPQGP 1339
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BLAST of mRNA_S-dermatodea_contig8422.16590.1 vs. uniprot
Match: A0A6H5JWV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV7_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 9.210e-5
Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0 
Query:   88 AALAYDRDVIGGDGLAYGDGRAQ-PERGEDFLRGVLPAEACDSCQVTDPGGSAVNSPRGP 146
            AALAYD+DV+GGDGL       + P+  +  L   L     DSC V+D GG AV SP+GP
Sbjct: 1200 AALAYDQDVLGGDGLGXXXXXXEKPDTVDGVLGKFLATGGYDSCHVSDAGGRAVYSPQGP 1259
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8422.16590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9D8_ECTSI4.300e-651.56MutL protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JWV7_9PHAE9.210e-548.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8422contigS-dermatodea_contig8422:5736..6880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8422.16590.1mRNA_S-dermatodea_contig8422.16590.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8422 5736..6911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8422.16590.1 ID=prot_S-dermatodea_contig8422.16590.1|Name=mRNA_S-dermatodea_contig8422.16590.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=146bp
MRPEDDTPPPDSFGDIEAWGRMEENNQAPPPEELVCFAETDYTAHGVHDA
VADGVNGCNVQDSETEKDDGSHTKDLQSAPVPRGAEDAALAYDRDVIGGD
GLAYGDGRAQPERGEDFLRGVLPAEACDSCQVTDPGGSAVNSPRGP
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