prot_S-dermatodea_contig8347.16526.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8347.16526.1
Unique Nameprot_S-dermatodea_contig8347.16526.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length171
Homology
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: D7G064_ECTSI (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G064_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.550e-40
Identity = 87/108 (80.56%), Postives = 89/108 (82.41%), Query Frame = 0
Query:   16 APGGALGGGGDLAPTTATLEGV--ADGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDA 121
            APGGAL GG  + P            GEGGLDAQLFLIKHLLTLREQLTPFHIQFV AEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDE+Q  A
Sbjct:  730 APGGALAGG-SVVPRXXXXXXXXXGSGEGGLDAQLFLIKHLLTLREQLTPFHIQFVHAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEVQARA 836          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A835YUG6_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.470e-28
Identity = 63/132 (47.73%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   37 VADGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTP--ALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLSWASKARAFQDGGDEGL 166
            VA     LD  LFL+KHLLTLREQL PF I F+R ++KLNF +T  ALR+  + +   ALFRLS +N L++   +S+P +DE++VDA+ +ME +L+  C+A + CA ++ A PLL++ +KAR F+  G  GL
Sbjct:  810 VAAHASSLDGHLFLVKHLLTLREQLEPFDISFMRNDRKLNFSTTVSALRRLAQPSSGLALFRLSMQNVLIQTAKNSLPAVDEVEVDARQDMEEALREGCNALVACAADMAAEPLLAFLAKARVFR--GRSGL 939          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A7S2XY61_9STRA (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY61_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.890e-28
Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 0
Query:   44 LDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLL 149
            LD  LFL+KHLL +REQLTPF IQF+  E+KL+F  T  A   F++    LFR    NAL+ L  + IP++ E  +DAK E+E +LK+AC++FI+CA EL+  PLL
Sbjct:    5 LDGNLFLVKHLLVMREQLTPFDIQFLAVEKKLDFTGTASAFYNFLQRRDRLFRFDGSNALLTLAKEGIPSVQEDTLDAKKELEETLKAACNSFISCAAELLGGPLL 110          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: W7U7M5_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7M5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.530e-28
Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 0
Query:   41 EGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLSWASKARAF 158
            +G +DA LFL+KHLL LREQL PF I+F   E++L+F STR AL +F      LFR+ + NAL+ L + S+PT++E +VD + E+EASLKSAC+AFI  A   +A P+ +   KARAF
Sbjct:  158 KGDMDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRMGTDNALLSLALGSVPTVNEEEVDTRKELEASLKSACNAFILHATSHLAEPIATLLQKARAF 275          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A7S2SLN9_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLN9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 4.410e-25
Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 0
Query:   42 GGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLSWASKARAF 158
            G  D  LFLIKHLLTLREQLTPF I F + +++L+F STR AL +F+     +F ++ +NAL+ L  D +P +DE  VDA+ E+E +LKS+C+ FI  A   +A PL+++++KARA 
Sbjct:   68 GSEDGDLFLIKHLLTLREQLTPFDINFSQLKRRLDFSSTRQALSRFMAERGRVFAMTRQNALLSLAKDGLPQVDEQCVDARKELEEALKSSCNHFIQKATSDLAEPLVAFSTKARAL 184          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A4D9D2E8_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2E8_9STRA)

HSP 1 Score: 110 bits (274), Expect = 8.440e-25
Identity = 60/124 (48.39%), Postives = 82/124 (66.13%), Query Frame = 0
Query:   41 EGGLDAQLF------LIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLSWASKARAF 158
            +G +DA LF       +KHLL LREQL PF I+F   E++L+F STR AL +F      LFR+ + NAL+ L + S+PT++E +VD + E+EASLKSAC+AFI  A   +A P+ +   KARAF
Sbjct:  729 KGDMDADLFPGTCLGAVKHLLVLREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRIGTDNALLSLALGSVPTVNEEEVDTRKELEASLKSACNAFILHATSHLAEPIATLLQKARAF 852          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A225WRW3_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WRW3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.850e-22
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 0
Query:   37 VADGEGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLS 150
            +A  +GGL   LFL+KHLLTLREQ+TPF IQF +  + L+F S+  A+ + +  T  LFRLS  N +V L    IP I E   D K E+E  LK +C+AFI   ++ +A PLL+
Sbjct:  525 IAATQGGLHGSLFLVKHLLTLREQITPFEIQFSQTSKALDFTSSADAMNELLVDTSTLFRLSGPNGIVGLFTRGIPQIQETTADVKKELEQELKKSCTAFIEIVLQQLAQPLLA 638          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A662YGD8_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGD8_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.780e-21
Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   41 EGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLS 150
            +GGL   LFL+KHLLTLREQ+TPF I+F +  + L+F S+  A+ + +     +FR S  N LV L    IP I E   D K E+E  LK +C+AFI   ++L+A PLL+
Sbjct:  360 QGGLHGALFLVKHLLTLREQITPFEIRFAQTSKALDFTSSADAMNQLLADASTIFRFSGPNGLVGLFTRGIPQIQETTADVKKELEQELKKSCTAFIETVLQLLARPLLA 469          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: A0A3F2RQD8_9STRA (Conserved oligomeric Golgi complex subunit 3 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQD8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.180e-20
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 0
Query:   41 EGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLS 150
            +GGL   LFL+KHLLTLREQ+TPF IQF +  + L+F S+  A+ + +     LFRLS  N +V L    IP I E   D K E+E  LK +C+ FI   ++ +A PLL+
Sbjct:  599 QGGLHGSLFLVKHLLTLREQITPFEIQFAQTSKALDFTSSGDAMNQLLADASTLFRLSGPNGIVGLFTRGIPQIQETTADVKKELEQELKKSCTVFIEIVMQQLAQPLLA 708          
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Match: G5A061_PHYSP (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G5A061_PHYSP)

HSP 1 Score: 97.4 bits (241), Expect = 2.190e-20
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 0
Query:   41 EGGLDAQLFLIKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLS 150
            +GGL   LFL+KHLLTLREQ+TPF IQF +  + L+F S+  A+ + +     LFR S  N +V L    IP I E   D K E+E  LK +C+AFI   ++ +A PLL+
Sbjct:  599 QGGLHGSLFLVKHLLTLREQITPFEIQFAQTSKALDFTSSADAMNELLVDASTLFRFSGPNGIVGLFTRGIPHIQETTADVKKELEQELKKSCTAFIEIVLQQLAQPLLA 708          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8347.16526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G064_ECTSI1.550e-4080.56Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A835YUG6_9STRA1.470e-2847.73Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S2XY61_9STRA1.890e-2850.94Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
W7U7M5_9STRA3.530e-2851.69Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S2SLN9_9STRA4.410e-2548.72Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
A0A4D9D2E8_9STRA8.440e-2548.39Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A225WRW3_9STRA9.850e-2246.49Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
A0A662YGD8_9STRA7.780e-2145.45Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A3F2RQD8_9STRA1.180e-2045.45Conserved oligomeric Golgi complex subunit 3 n=4 T... [more]
G5A061_PHYSP2.190e-2045.45Conserved oligomeric Golgi complex subunit 3 (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 42..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8347contigS-dermatodea_contig8347:128..3988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8347.16526.1mRNA_S-dermatodea_contig8347.16526.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8347 127..3988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8347.16526.1 ID=prot_S-dermatodea_contig8347.16526.1|Name=mRNA_S-dermatodea_contig8347.16526.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=171bp
KNSAASPSSSAERNAAPGGALGGGGDLAPTTATLEGVADGEGGLDAQLFL
IKHLLTLREQLTPFHIQFVRAEQKLNFGSTRMALRKFIRHTPALFRLSSK
NALVELTVDSIPTIDEIQVDAKGEMEASLKSACSAFITCAVELIASPLLS
WASKARAFQDGGDEGLERLRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3