prot_S-dermatodea_contig83245.16510.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig83245.16510.1
Unique Nameprot_S-dermatodea_contig83245.16510.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length236
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83245.16510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 57..73
e-value: 0.0032
score: 26.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 56..72
e-value: 7.7E-5
score: 22.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 58..73
score: 10.213
NoneNo IPR availableGENE3D4.10.60.10coord: 17..87
e-value: 6.8E-6
score: 28.1
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 49..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig83245contigS-dermatodea_contig83245:25..732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig83245.16510.1mRNA_S-dermatodea_contig83245.16510.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig83245 25..733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig83245.16510.1 ID=prot_S-dermatodea_contig83245.16510.1|Name=mRNA_S-dermatodea_contig83245.16510.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=236bp
APQGRKVPGGRRPRPRGRGSRPTQGPNSSSSSSSSNNNNRRSSKYISWKS
PFAKSKTCYRCGKLGHVRARCPDRAADSLSVDSRAEDTAGLRAVSASGKS
LDGMGVSGCCFSAESHTSGGCSLVETENKWLLSFSDNISWHPNFTSDLQP
FSEGIAAGLGIVFPLKGREPMLLWDVCTSGRLSDYCTRSTAVRLSMRGGV
SARGSDALPASALPVLEAPVEVDKTRGGPAVCINKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf