prot_S-dermatodea_contig82074.16401.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A6H5L9Y2_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y2_9PHAE) HSP 1 Score: 154 bits (390), Expect = 1.780e-41 Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0
Query: 10 MHAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRV 95
M ++V PGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLE+R GADEAEGQ++AKRV
Sbjct: 1113 MSSKVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRV 1198
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: D8LRY3_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY3_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.790e-41 Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0
Query: 10 MHAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRV 95
M ++V PGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLE+R GADEAEGQ++AKRV
Sbjct: 1112 MSSKVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRV 1197
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A7S2GUH7_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GUH7_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.680e-31 Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 0
Query: 11 HAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRVRCIF 99
HA+V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TP LTIYL R E + +A DIAK V +
Sbjct: 27 HAKVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTIYL--RPEVSGDA---DIAKTVHSLI 110
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A836CHC4_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC4_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.100e-30 Identity = 66/86 (76.74%), Postives = 70/86 (81.40%), Query Frame = 0
Query: 10 MHAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRV 95
M A+V GEMCGVLAAQSIGEPITQMTLNTFH+AGVSAKNVTLGVPRVKEIINVA N RTPSLTIYL D + Q+ AKRV
Sbjct: 1104 MSARVSAGEMCGVLAAQSIGEPITQMTLNTFHYAGVSAKNVTLGVPRVKEIINVAANPRTPSLTIYL-----SPDSEQDQESAKRV 1184
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A7S2KD87_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KD87_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.080e-29 Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 0
Query: 11 HAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRVRCIF 99
HA+V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TP LTIYL+ G D+AK V +
Sbjct: 249 HAKVSPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTIYLQDHVSG-----DADVAKLVHSMI 332
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A699ZZ48_HAELA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZZ48_HAELA) HSP 1 Score: 111 bits (278), Expect = 1.240e-29 Identity = 53/76 (69.74%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 11 HAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEA 86
AQ PGE G +AAQS+GEP TQMTLNTFHFAGVSAKNVTLGVPR+ EIIN+AKN++TPSL++YL++R EA
Sbjct: 22 QAQANPGECVGTVAAQSLGEPTTQMTLNTFHFAGVSAKNVTLGVPRLTEIINLAKNIKTPSLSVYLDERHANDKEA 97
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: B8BQ02_THAPS (DNA-directed RNA polymerase subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ02_THAPS) HSP 1 Score: 120 bits (301), Expect = 1.790e-29 Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 0
Query: 11 HAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRVRCIF 99
HA+V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TP LTIYL+ G D+AK V +
Sbjct: 1074 HAKVSPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTIYLQNHVSG-----DADVAKLVHSMI 1157
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A699WYF7_TANCI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699WYF7_TANCI) HSP 1 Score: 110 bits (276), Expect = 2.710e-29 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0
Query: 14 VPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRVRCIF 99
V PGEM G +AAQSIGEP TQMTLN FH+AGVSAKNVTLGVPR++EIIN+AKN++TPSL++YL+ D ++ D AK V+C
Sbjct: 3 VAPGEMIGCVAAQSIGEPATQMTLNNFHYAGVSAKNVTLGVPRLREIINIAKNIKTPSLSVYLKP-----DISKTNDQAKNVQCAL 83
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A7S2K6R8_9STRA (DNA-directed RNA polymerase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6R8_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.240e-29 Identity = 61/89 (68.54%), Postives = 70/89 (78.65%), Query Frame = 0
Query: 11 HAQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRVRCIF 99
++V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TPSLT+YL+Q G D+AK V +
Sbjct: 142 QSKVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPSLTVYLQQHVSG-----DSDVAKLVHSLL 225
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Match: A0A2R5GU24_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU24_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.570e-29 Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 0
Query: 12 AQVPPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEQREEGADEAEGQDIAKRV 95
+ V PGEMCGVLAAQSIGEP TQMTLNTFHFAGVSAKNVTLGVPR+KE+IN AKNV+TPS+T+YL++ EA ++ R+
Sbjct: 1073 SMVNPGEMCGVLAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEVINGAKNVKTPSVTVYLDEEHRNT-EARASEVMSRL 1155 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82074.16401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-dermatodea_contig82074.16401.1 ID=prot_S-dermatodea_contig82074.16401.1|Name=mRNA_S-dermatodea_contig82074.16401.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=106bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|