prot_S-dermatodea_contig81002.16295.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig81002.16295.1
Unique Nameprot_S-dermatodea_contig81002.16295.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
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BLAST of mRNA_S-dermatodea_contig81002.16295.1 vs. uniprot
Match: A0A6H5KYX0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.780e-25
Identity = 77/142 (54.23%), Postives = 84/142 (59.15%), Query Frame = 0 
Query:    1 RPPPESARGRLKSCLSSRKRARAGTPSAAETVSS-------DTPDHT------GSTAESYGRLSPPAASDRALGRG-SDVQTPGAMVPGA------GRGSAGTLEMGMETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 122
            RP PESARGRLKSCLSSRKRAR G    A + S         TPD T      GS A +    SP      A G G ++   PG   PG+      G G     +M +ETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK
Sbjct:  989 RPAPESARGRLKSCLSSRKRARGGPAGVASSSSGRSPSASLGTPDATNSAGTDGSLAMAGSSPSPSRGGGAAAGGGVAEGAPPGVKTPGSSWGVSCGGGRGPASDMVLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 1130
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BLAST of mRNA_S-dermatodea_contig81002.16295.1 vs. uniprot
Match: D7FTI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI0_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 5.030e-25
Identity = 77/143 (53.85%), Postives = 82/143 (57.34%), Query Frame = 0 
Query:    2 PPPESARGRLKSCLSSRKRARAGTPSAAET------VSSDTPDHT------GSTAESYGRLSPPAASDRALGRGSDVQTP-GAMVPGAGRGSAGTL---------EMGMETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 122
            P PESARGRLKSCLSSRKRAR G    A +       S  TPD T      GS A +    SP      A G G     P G   PG   G +G           +MG+ETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK
Sbjct:  953 PAPESARGRLKSCLSSRKRARGGPAGVASSSGRSPSASLGTPDLTNSAGTDGSLAMAGSSPSPSRGGGAAAGSGVIAGAPHGVKTPGPSSGVSGXXXXXXRGPASDMGLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 1095
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig81002.16295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYX0_9PHAE3.780e-2554.23Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTI0_ECTSI5.030e-2553.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig81002contigS-dermatodea_contig81002:175..540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig81002.16295.1mRNA_S-dermatodea_contig81002.16295.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig81002 175..540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig81002.16295.1 ID=prot_S-dermatodea_contig81002.16295.1|Name=mRNA_S-dermatodea_contig81002.16295.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
RPPPESARGRLKSCLSSRKRARAGTPSAAETVSSDTPDHTGSTAESYGRL
SPPAASDRALGRGSDVQTPGAMVPGAGRGSAGTLEMGMETPRRVMFGAPM
AAEFNHLSPSNRLTPMPSRDAK
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