prot_S-dermatodea_contig8063.16247.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8063.16247.1
Unique Nameprot_S-dermatodea_contig8063.16247.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length978
Homology
BLAST of mRNA_S-dermatodea_contig8063.16247.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI)

HSP 1 Score: 1202 bits (3111), Expect = 0.000e+0
Identity = 666/967 (68.87%), Postives = 764/967 (79.01%), Query Frame = 0
Query:    9 IQSGAQTKTLPEVVQLMLHAPAAMWAALDSNSVLEAANILLRCRVGWAEVSTSFSGDTDSNLAAFLRSHVTYVEQFPRRIVLAGTRLLTRSSNTNETAGALAALLQLQALKEAQPLRCLLELLLRRRGGAVVAMLTRASKAKRGADIEGVLRSSVTTVEKTILDVYAIFAPRPDGSCMLVELAHPSFSWQGTLKLTAHDTKTLCTKWLAVLAPKIRAFSKQLLGAAGDTIVLARIRGALWKATHEEGAWASSVPGIRPVVRDGAADEAVWTEAASQVVDASELADGPNTG----GLGPSSPSLDLWSLLFSRIFADLAEALLKESLVCIRQDVQDRLDSILLTITGNESTLTGQDGSDQIAGC--PQRPGALMAHDILAAAEAVVSLLTSELISLAGDAWSLTERGDKTAADALSTAFYLICVDMAAGLANHLRIALHEIHVCIKSAAQSDRRSLPYEGGVRELEDAVGSFADAGLVIGRVAWMLSGPSGRPLQSALTPPACFAQRLRGRIEEQQLEAAFVIADTDGDGVVDAEEAAEALQAVSFGASAAVVLDPSRYPSFTLSEFFLFATRLLEEQRPRQHLVSCLEGLLAESLTVWGDWALEKSAILLTEGCNALTSLCFNPGLTDDVWRQTHGMWEDKTIELDRDDGDETQETVHLPIMISPAFLCYIEGVAAELGRILSTADLVDNTTQNNRGGWDSEEAGAWRDGGRETRLSPEGRGTGRGAARYARSLAAVRASNDLKQALFELCEGPKAAAAHACEAAHLQLLLDALFLQRWVVGLEESTTVSIDTVVETLCDLVDPINLQIYMPHLQAAASACWAACHTSLSLIFEQVVPHGSS-SSVSMSPDGALGSSSSFLALVPKARRFELLPLPLDGVRLQHPNGTPLGRNSSGRKPGRSAEVDGAGSSAQARGMEAGRLALAGLMGQVGSVGNVLSAQNVNVQSVFGAASLFLGGRNRR-TDGD 967
            ++  A  + + EVVQLMLHAPAAMWAALDSN VLEAAN++LRCR  W ++S++FS   DS +AAFLR HVTYVEQFPRRI+ AGTRLLTRS NT ETAGAL A+LQLQAL++A PLRCLLELLL RRGGAVVAMLTRA+K +  +DIE VL ++VTTV++TI+DV+AIFAP  +GSCML +LAHPS   Q +L+L+AHD K +CT WL+VL PKIR F ++LL A GDT  LARIRG+LWK TH +GAWA+   G R      A    +W EA S  VD S    G N      G   SSP LDLWSLLFS+IFADLAEALLK+SL  IR+DV+ RLDSILL IT NE T  G   +   +G    ++P ALMAHDILAAA+AVVSLLTSE+ +LAGDA  LTERGD+TAADAL T+FYL+ VDMAAGLANHLRIAL EIH CIKSAA+ +RR +PY G + +LE+AV SFADAGL+IGRVAWML+G SG PLQ ALTPPACFAQR RGRIEEQQLEAAFVIADT+GDGVVD EEAAEALQAVSFGASAA+ +DPSRY SFTL+EFFLFATRLLEEQRPRQHL SCL+ LL+ESL VW +WALEKSA LLTEGCNA+  LC NPG+T+D+WRQ HG+WEDKTIELDRDDGD  QETVH PIM+SPA LCYIEGVAAEL RILSTADL +     +  GW +++A    D  R    S  G+ TG+GAARYARSLAAVRAS+DL  AL  LCEG  +AAA ACEAA LQLLLDALFLQ+WV    +S+  S+++VV TLCDLVDPINLQIYMPHLQ AASACWAACHT LSLIFEQ +P  S+ SS S+SPDGALGSSSSF+ L PK RRFE+LPL L+ VRLQHPNG+   RNS G K G  A  DG G+SAQARG+EAGR ALAGL       G+VLSAQN +VQSVFGAASLFLGGRNRR  DGD
Sbjct:   96 VREDAAARHVMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGVDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTQETAGALTAILQLQALEDANPLRCLLELLLLRRGGAVVAMLTRATKEENSSDIEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSCRSQASLRLSAHDAKDMCTTWLSVLTPKIRVFGERLLRATGDTNSLARIRGSLWKVTHGDGAWATPAAGTRAGGSIRAVQGLMWMEATSFAVDVSAWDGGTNGSTRAWGQDVSSPQLDLWSLLFSQIFADLAEALLKDSLASIRRDVECRLDSILLAITRNE-TGQGVQEARSFSGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAVSSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRYASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWSAPGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPKSSP-SMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSSSAPSSASVSPDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASGDGPGASAQARGLEAGRQALAGL-------GSVLSAQNAHVQSVFGAASLFLGGRNRRGEDGD 1053          
BLAST of mRNA_S-dermatodea_contig8063.16247.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 7.450e-18
Identity = 78/216 (36.11%), Postives = 105/216 (48.61%), Query Frame = 0
Query:  487 LSGPSGRPLQSALTPP-----ACFAQRLRGRIEEQQLEAAFVIADTDGDGVVDAEEAAEALQAVSFGASAAVVLDPSRYPSFTLSEFFLFATRLLEEQR------PRQHLVSCLEGLLAESLTVWGDWALEKSAILLTEGCNALTSLCFNPGLTDDVWRQTHGMWEDKTIELDRD-DGDETQETVHLPIMISPAFLCYIEGVAAELGRILSTADLV 690
            L G  GR L+ A+T P        A R  G +   QLEAAF IADT+GDG+++ EE  EALQAV+F  +  +      + S T  EF L AT LLEEQ       P  HL   L  LLA S+ +W +     +A L  +   AL            + ++    W +  + LD D DGD  +E V LP   +PA   Y+  +AAE   +   ADL+
Sbjct:  740 LQGRRGRGLRQAVTAPKEGSAGGGAGRAVGLVGLDQLEAAFEIADTNGDGLLEGEEIGEALQAVAFSHADKLAQLEHAHASLTFVEFALLATPLLEEQARHPLEDPLVHLAEGLRSLLARSVKLWANLV---AACLNQQLQQALAQTARASAAACHLAQRQGATWHEHRLTLDSDLDGDSVEERVRLPAAATPALQRYVLALAAEAAALSCAADLL 952          
BLAST of mRNA_S-dermatodea_contig8063.16247.1 vs. uniprot
Match: W7TQZ7_9STRA (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQZ7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.490e-9
Identity = 119/486 (24.49%), Postives = 188/486 (38.68%), Query Frame = 0
Query:  270 DGAADEAVWTEAASQVVDASELADGPNTGGLGP-----SSPSLDLWSLLFSRIFADLAEALLKESLVCIRQDVQDRLDSILLTITGNESTLT--GQDGSDQIAGCPQRPGALMAHDILAAAEAVVSLLTSELISLAGDAWSLTERGDKTAADALSTAFYLICVDMAAGLANHLRIALHE-----------------IHVCIKSAAQSDRRSLPYEGGVRELEDAVGSFADAGLVIGRVAWMLSGPSGRPLQSALTP--------------PACFA--------QRLRGR--------IEEQQLEAAFVIADTDGDGVVDAEEAAEALQAVSFGASAAVVLDPSRYP--SFTLSEFFLFATRLLEEQRPRQHLVSCLEGLLAES----LTVWGDWALEK-SAILLTEGCNALT---SLCFNPGLTD---DVWRQTHGMWEDKTIELDRDDGDETQETVHLPIMISPAFLCYIEGVAAELGRILSTAD 688
            DGA +E   +E   +   A   A       LG      ++  LD+W+ LFS  FA + E L + S+  + Q    + + IL  ++ + S+ +  GQD                A ++  AA+ +   L   L  +   A  L + GD+ AA AL ++ +   + + + L++  R  L E                 IH    S A     SLP    +     +  S  DA L++ R AW L   + R L S  +P                C +         R RG         I+  QLE+AF IAD+ G+G +   E  E L   + G S A    PS YP  S T +E  L     L+E +P     + L+     +    L  W    +      +L EG   L    +   N G+     D  R     WE++ +  + ++G   ++ + +P   SP    +   +AAELGR+    D
Sbjct:  442 DGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVSSSPSSSSSLGQDRR------------FTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPA-----SLPSSSSLTP--PSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLD--TLGLSQASSSPPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQD 906          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8063.16247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FW61_ECTSI0.000e+068.87Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
A0A836CMC2_9STRA7.450e-1836.11Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
W7TQZ7_9STRA5.490e-924.49Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 517..545
e-value: 0.0023
score: 27.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 513..548
score: 12.282
IPR033370Conserved oligomeric Golgi complex subunit 1PANTHERPTHR31658FAMILY NOT NAMEDcoord: 21..342
coord: 639..915

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8063contigS-dermatodea_contig8063:3345..6881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8063.16247.1mRNA_S-dermatodea_contig8063.16247.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8063 2769..6916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8063.16247.1 ID=prot_S-dermatodea_contig8063.16247.1|Name=mRNA_S-dermatodea_contig8063.16247.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=978bp
MNENFPPAIQSGAQTKTLPEVVQLMLHAPAAMWAALDSNSVLEAANILLR
CRVGWAEVSTSFSGDTDSNLAAFLRSHVTYVEQFPRRIVLAGTRLLTRSS
NTNETAGALAALLQLQALKEAQPLRCLLELLLRRRGGAVVAMLTRASKAK
RGADIEGVLRSSVTTVEKTILDVYAIFAPRPDGSCMLVELAHPSFSWQGT
LKLTAHDTKTLCTKWLAVLAPKIRAFSKQLLGAAGDTIVLARIRGALWKA
THEEGAWASSVPGIRPVVRDGAADEAVWTEAASQVVDASELADGPNTGGL
GPSSPSLDLWSLLFSRIFADLAEALLKESLVCIRQDVQDRLDSILLTITG
NESTLTGQDGSDQIAGCPQRPGALMAHDILAAAEAVVSLLTSELISLAGD
AWSLTERGDKTAADALSTAFYLICVDMAAGLANHLRIALHEIHVCIKSAA
QSDRRSLPYEGGVRELEDAVGSFADAGLVIGRVAWMLSGPSGRPLQSALT
PPACFAQRLRGRIEEQQLEAAFVIADTDGDGVVDAEEAAEALQAVSFGAS
AAVVLDPSRYPSFTLSEFFLFATRLLEEQRPRQHLVSCLEGLLAESLTVW
GDWALEKSAILLTEGCNALTSLCFNPGLTDDVWRQTHGMWEDKTIELDRD
DGDETQETVHLPIMISPAFLCYIEGVAAELGRILSTADLVDNTTQNNRGG
WDSEEAGAWRDGGRETRLSPEGRGTGRGAARYARSLAAVRASNDLKQALF
ELCEGPKAAAAHACEAAHLQLLLDALFLQRWVVGLEESTTVSIDTVVETL
CDLVDPINLQIYMPHLQAAASACWAACHTSLSLIFEQVVPHGSSSSVSMS
PDGALGSSSSFLALVPKARRFELLPLPLDGVRLQHPNGTPLGRNSSGRKP
GRSAEVDGAGSSAQARGMEAGRLALAGLMGQVGSVGNVLSAQNVNVQSVF
GAASLFLGGRNRRTDGDEDGMLGNTFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR033370COG1