prot_S-dermatodea_contig8038.16223.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8038.16223.1
Unique Nameprot_S-dermatodea_contig8038.16223.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length178
Homology
BLAST of mRNA_S-dermatodea_contig8038.16223.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 5.930e-28
Identity = 86/221 (38.91%), Postives = 100/221 (45.25%), Query Frame = 0
Query:   24 TVGDPLAALMXXXXXXXXXXXXXXXXXXXXXXXXXGGEDRARLEEAVKVEPGSVTATIAKTGPGVFTIAVMEWMVANSAMSDKE-------SVTDRAAPRD-----QTAAA------------------------------------------------------VMVLPPSYLYPVPNDAK----GDLIGDGREHGIRERAGGYFSEESVAAHLWGKSWQ 174
            TVGDPL+ALM                         GG+DRARL +AV+VE  S T TI KTGPGVFT AVM WMV+++   D+        S T  AA  D      TAA                                                        M+LPPSYLYP+PN+A     G LIGDG E G+RERAGGY S ES+AAHLWG+SWQ
Sbjct:  293 TVGDPLSALMGALGEEGGAGGLLAGLL--------GGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDRAAPATADGSGTSSAAEEDIFHSTGTAARDADAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAATRPAMILPPSYLYPIPNNAAAAKAGLLIGDGTESGVRERAGGYLSSESLAAHLWGRSWQ 505          
BLAST of mRNA_S-dermatodea_contig8038.16223.1 vs. uniprot
Match: D7G7P2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P2_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.060e-26
Identity = 91/243 (37.45%), Postives = 108/243 (44.44%), Query Frame = 0
Query:    5 RGAASASSSVGTGLGGQNGTVGDPLAALMXXXXXXXXXXXXXXXXXXXXXXXXXGGEDRARLEEAVKVEPGSVTATIAKTGPGVFTIAVMEWMVANSAMSDKESVTDRAAPRDQTAAAVMV---------------------------------------------------------------------LPPSYLYPVPNDAK----GDLIGDGREHGIRERAGGYFSEESVAAHLWGKSWQ 174
            R AA  + + G G GG+  TVGDPL+ALM      XXXXX              GG+DRARL +AV+VE  S T TI KTGPGVFT AVM WMV+++   D  + T        + A   +                                                                     LPPSYLYPVPN+A     G LIGDG E G+RER GGY S ES+AAHLWG+SWQ
Sbjct:   42 RAAAGVTDAAGDG-GGRGTTVGDPLSALMGALGGEXXXXXLLTGLL--------GGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAPTTTDGSGTISTAQEEIFHSTGTAALDTDVFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPSYLYPVPNNAAAAKAGLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQ 275          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8038.16223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQP8_9PHAE5.930e-2838.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7P2_ECTSI1.060e-2637.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8038contigS-dermatodea_contig8038:859..1987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8038.16223.1mRNA_S-dermatodea_contig8038.16223.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8038 859..1989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8038.16223.1 ID=prot_S-dermatodea_contig8038.16223.1|Name=mRNA_S-dermatodea_contig8038.16223.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=178bp
TASARGAASASSSVGTGLGGQNGTVGDPLAALMGALAGAVGRGGGGGGGG
EGLLAGLLGGEDRARLEEAVKVEPGSVTATIAKTGPGVFTIAVMEWMVAN
SAMSDKESVTDRAAPRDQTAAAVMVLPPSYLYPVPNDAKGDLIGDGREHG
IRERAGGYFSEESVAAHLWGKSWQPGGL
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