prot_S-dermatodea_contig13220.1918.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13220.1918.1
Unique Nameprot_S-dermatodea_contig13220.1918.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length407
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig13220.1918.1 vs. uniprot
Match: D8LH68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH68_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 3.020e-118
Identity = 362/406 (89.16%), Postives = 380/406 (93.60%), Query Frame = 0 
Query:    2 DGDTALYVAAKAGHDEAVRALLEVAATKVNWQNHKGITSVSVAAHKGRQEIVKMLIAADADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAECAKRTLVLQRVFNLYTAGKLAITETQPDVSGSPSFTMLVRSLISPVSSNRAVFEHIASFIPLPRLWDDSLEKLRRRCHIDATEAIRDAFRIIDEVLADLSIVNGPDQGAHLVRLWEHPPLGQRLVAELQMPPMLVQALKSWGGAQEVVTSMAGGEVSFQPRVAMRVSFTASSL 407
            DGDTALYVAAKAGHDEAVRALLEV ATKVNWQNHKGITSVSVAAHKGR+EIVKMLI+ADAD     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAE A+RTLVLQ+VFN YTAGKL +TETQPDVSGS S +ML+RSLISP+SSNRAVFEHIASFIPLPRLWD SLEK+RRRCHIDATEAIR+AFRIIDEVLADL+ V+GPD G HLVRLWEHP LGQRL  +L MPP+LVQAL+SWGG QE VTS+AGGEV+FQPRVA RV   A+ L
Sbjct:   47 DGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLLVTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVATRVVALATEL 452
[Close]
BLAST of mRNA_S-dermatodea_contig13220.1918.1 vs. uniprot
Match: A0A835YM71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM71_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.630e-22
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 0 
Query:  284 RAVFEHIASFIPLPRLWDDSLEKLRRRCHIDATEAIRDAFRIIDEVLADLSIVNGPDQGAHLVRLWEHPPLGQRLVAELQMPPMLVQALKSWGGAQEVVTSMAGGEVSFQPRVAMRV 400
            R +F+ I  F+PLPRLW+DSL +LRRRCHIDA EA+R A +++DEV  DL I  GP+Q  HLV +     L + L  +L MP  L+ +L+ W   Q +   +  G V+++P VA +V
Sbjct:  701 RGLFDRIVDFVPLPRLWEDSLGRLRRRCHIDANEAVRGALQLVDEVFTDLQIRAGPNQRGHLVAINRSEALAETLATQLGMPRNLLDSLRDWSDIQSLSVRLERG-VNYEPTVASQV 816
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13220.1918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH68_ECTSI3.020e-11889.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YM71_9STRA6.630e-2245.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 3..18
score: 41.1
coord: 118..132
score: 35.94
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 102..131
e-value: 0.0067
score: 25.6
coord: 135..164
e-value: 0.67
score: 19.0
coord: 168..197
e-value: 9.6E-6
score: 35.1
coord: 36..65
e-value: 0.11
score: 21.6
coord: 69..98
e-value: 0.025
score: 23.8
coord: 2..32
e-value: 0.0031
score: 26.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 2..27
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 36..68
score: 10.846
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 168..200
score: 13.678
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 69..101
score: 10.633
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 102..134
score: 13.117
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..65
e-value: 1.2E-14
score: 56.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 138..224
e-value: 2.4E-25
score: 91.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 66..137
e-value: 7.2E-22
score: 79.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..222
NoneNo IPR availablePFAMPF13857Ank_5coord: 169..209
e-value: 2.5E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR24184FAMILY NOT NAMEDcoord: 44..229
coord: 2..96
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 64..132
e-value: 2.1E-13
score: 50.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..221
score: 60.324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13220contigS-dermatodea_contig13220:407..5614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13220.1918.1mRNA_S-dermatodea_contig13220.1918.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13220 407..5614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13220.1918.1 ID=prot_S-dermatodea_contig13220.1918.1|Name=mRNA_S-dermatodea_contig13220.1918.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=407bp
TDGDTALYVAAKAGHDEAVRALLEVAATKVNWQNHKGITSVSVAAHKGRQ
EIVKMLIAADADVNIDSNNGSTPLIQASHFGHAEVVKLLVKAHALVDKAN
QKGTTALMRATQEGNEEVVRILVAAGADVSKRNNERMNALMLGSQRGHAA
IVQALINHKADIDGQTAQGSTALMLACKRGHEEVVRVLLTAGAELHQKDS
RGRTARDTASKRSHEKILAMLHPSKQMRLMQDAECAKRTLVLQRVFNLYT
AGKLAITETQPDVSGSPSFTMLVRSLISPVSSNRAVFEHIASFIPLPRLW
DDSLEKLRRRCHIDATEAIRDAFRIIDEVLADLSIVNGPDQGAHLVRLWE
HPPLGQRLVAELQMPPMLVQALKSWGGAQEVVTSMAGGEVSFQPRVAMRV
SFTASSL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom