prot_S-dermatodea_contig13141.1884.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13141.1884.1
Unique Nameprot_S-dermatodea_contig13141.1884.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length81
Homology
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A6H5KQ95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ95_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 3.840e-46
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRA+ELDRLLNLCNFPSLVIHSRLKQEER
Sbjct:  263 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAVELDRLLNLCNFPSLVIHSRLKQEER 342          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: D8LK23_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK23_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.980e-44
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRA+ELDRLLNLCNFPSLVIHSRLKQEER
Sbjct:  262 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAVELDRLLNLCNFPSLVIHSRLKQEER 341          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A482RXG3_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXG3_9ARCH)

HSP 1 Score: 129 bits (324), Expect = 5.070e-36
Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEI+VDD+TKLTLHGLQQYY++L E+EKNRKL DLLD+LDFNQVVIF +KV RA+EL +LL  CNFPS+ IHS LKQEER
Sbjct:    1 MEIFVDDDTKLTLHGLQQYYVRLGESEKNRKLTDLLDMLDFNQVVIFVAKVARAVELSKLLEDCNFPSICIHSSLKQEER 80          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A836CDU8_9STRA (Dead box family RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.170e-36
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVD E KLTLHGLQQY+++LAETEKNRKLNDLLD L+FNQVVIFCSKV+RAIEL+RLL +CNFPS V+HSR+ QE R
Sbjct:  248 MEIYVDKEDKLTLHGLQQYFVRLAETEKNRKLNDLLDALEFNQVVIFCSKVERAIELNRLLLMCNFPSTVLHSRMAQETR 327          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A7S2CS57_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CS57_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.440e-35
Identity = 61/80 (76.25%), Postives = 72/80 (90.00%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            ME+++D++TKLTLHGLQQYY+KL E+EKNRKLNDLLD L+FNQVVIF SKV RA EL+RLL+ CNFPSL IHS +KQEER
Sbjct:   26 MEVFIDNDTKLTLHGLQQYYVKLKESEKNRKLNDLLDALEFNQVVIFVSKVARATELNRLLDECNFPSLCIHSGMKQEER 105          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A392R5Y0_9FABA (DEAD-box ATP-dependent RNA helicase 56-like n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392R5Y0_9FABA)

HSP 1 Score: 123 bits (309), Expect = 3.510e-35
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDDE KLTLHGL Q+YIKL E EKNRKLNDLLD LDFNQVVIF   V RA ELDRLL  CNFPS+ IHS + QEER
Sbjct:    1 MEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEER 80          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A7S4E8S1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8S1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.820e-35
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDD+TKLTLHGLQQYY+KL E EKNRKLNDLLD LDFNQVVIF SKV RA ELDRLL  CNFPS+ IHS + QEER
Sbjct:  241 MEIYVDDDTKLTLHGLQQYYVKLQEAEKNRKLNDLLDALDFNQVVIFVSKVARATELDRLLTECNFPSVCIHSGMGQEER 320          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: A0A7S1H579_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H579_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.570e-34
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDD+TKLTLHGLQ YY+KLAE EKNRKLNDLLD L+FNQVVIF SKV RA EL+RLL  CNFPS+ IH+ +KQEER
Sbjct:  137 MEIYVDDDTKLTLHGLQLYYVKLAEAEKNRKLNDLLDALEFNQVVIFVSKVARANELNRLLTECNFPSICIHAGMKQEER 216          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: F0XZR0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZR0_AURAN)

HSP 1 Score: 130 bits (328), Expect = 2.310e-34
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDD+TKLTLHGLQQYY+KL E EKNRKLNDLLD LDFNQVVIF SKV RA ELDRLL  CNFPS+ IHS + QEER
Sbjct:  272 MEIYVDDDTKLTLHGLQQYYVKLQEAEKNRKLNDLLDALDFNQVVIFVSKVARATELDRLLCECNFPSVCIHSGMTQEER 351          
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Match: UPI000CE27298 (DEAD-box ATP-dependent RNA helicase 56-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE27298)

HSP 1 Score: 121 bits (304), Expect = 3.770e-34
Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSKVDRAIELDRLLNLCNFPSLVIHSRLKQEER 80
            MEIYVDDE KLTLHGL Q+YIKL+E+EKNRKLNDLL+ LDFNQVVIF   V+RA EL++LL  CNFPS+ IHS + QEER
Sbjct:    1 MEIYVDDEAKLTLHGLVQHYIKLSESEKNRKLNDLLNALDFNQVVIFVKSVNRAAELNKLLKECNFPSICIHSGMSQEER 80          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13141.1884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ95_9PHAE3.840e-4698.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK23_ECTSI1.980e-4498.75DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A482RXG3_9ARCH5.070e-3676.25DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
A0A836CDU8_9STRA5.170e-3680.00Dead box family RNA helicase n=1 Tax=Tribonema min... [more]
A0A7S2CS57_9STRA1.440e-3576.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A392R5Y0_9FABA3.510e-3577.50DEAD-box ATP-dependent RNA helicase 56-like n=1 Ta... [more]
A0A7S4E8S1_9STRA7.820e-3581.25Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1H579_9STRA1.570e-3478.75Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
F0XZR0_AURAN2.310e-3481.25Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
UPI000CE272983.770e-3473.75DEAD-box ATP-dependent RNA helicase 56-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 9..80
e-value: 5.2E-13
score: 50.5
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..80
NoneNo IPR availablePANTHERPTHR24031:SF679coord: 1..80
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13141contigS-dermatodea_contig13141:2952..3902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13141.1884.1mRNA_S-dermatodea_contig13141.1884.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13141 2952..3902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13141.1884.1 ID=prot_S-dermatodea_contig13141.1884.1|Name=mRNA_S-dermatodea_contig13141.1884.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=81bp
MEIYVDDETKLTLHGLQQYYIKLAETEKNRKLNDLLDLLDFNQVVIFCSK
VDRAIELDRLLNLCNFPSLVIHSRLKQEER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase