prot_S-dermatodea_contig13079.1852.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13079.1852.1
Unique Nameprot_S-dermatodea_contig13079.1852.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length79
Homology
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BLAST of mRNA_S-dermatodea_contig13079.1852.1 vs. uniprot
Match: D8LS64_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS64_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 6.760e-24
Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 0 
Query:    1 VPFTLHLPEDLFYSPKERSRIIVHKPIRPGDPEFKDVTTLRKHCFDTVMALEKQAAXXXXXXXXAGGENAPPEAKKTK 78
            VPFTL LPE+LF+ P++R++I VH+PIRPGDP FKDV TLRKHCFDTVM  +K+AA          G     E+KKTK
Sbjct:  136 VPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTVMRKQKEAAAAAAMAGEGAGSTPVIESKKTK 213
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BLAST of mRNA_S-dermatodea_contig13079.1852.1 vs. uniprot
Match: A0A6H5JNW3_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNW3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.100e-18
Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    1 VPFTLHLPEDLFYSPKERSRIIVHKPIRPGDPEFKDVTTLRKHCFDTVM 49
            VPFTL LPE+LF+ P++R++I VH+P+RPGDP FKDV TLRKHCFDTVM
Sbjct:  266 VPFTLDLPENLFHGPRQRTKITVHEPVRPGDPAFKDVATLRKHCFDTVM 314
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13079.1852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS64_ECTSI6.760e-2458.971-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A6H5JNW3_9PHAE3.100e-1873.47PlsC domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13079contigS-dermatodea_contig13079:150..914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13079.1852.1mRNA_S-dermatodea_contig13079.1852.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13079 150..914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13079.1852.1 ID=prot_S-dermatodea_contig13079.1852.1|Name=mRNA_S-dermatodea_contig13079.1852.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=79bp
VPFTLHLPEDLFYSPKERSRIIVHKPIRPGDPEFKDVTTLRKHCFDTVMA
LEKQAAAAAAATATAGGENAPPEAKKTK*
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