prot_S-dermatodea_contig13044.1837.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig13044.1837.1
Unique Name	prot_S-dermatodea_contig13044.1837.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	106

Homology

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 7.780e-20
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDG  AW+ LE+ +D  +   R+    +L  T MK G+DP DFL  MD  R RL DMGE I  E + D+LL AL+ +Y F+R TS +DR FGL +I++ M +M
Sbjct:   58 GDGAGAWKTLEDSFDGSTKEARRACRYKLFHTTMKSGEDPSDFLAKMDDLRLRLEDMGEKIPDESYEDVLLRALSKEYYFIRQTSHKDRTFGLTEIRTTMVNM 160

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.210e-14
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 0

Query:   36 MKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            M QG+DPD F   ++  R R  DM E I+ ERF D++L A++ DYD+VR TSFR R FGLE+IK+ M+SM
Sbjct:    1 MAQGEDPDGFFITVEDVRQRPKDMVEIISDERFEDVILQAISNDYDYVRPTSFRVRHFGLEEIKTTMKSM 70

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5KMR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR7_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.550e-11
Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++        +L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY F++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFTELKANYNRVTDEVISAKLNDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKFIKMMVFRDPSFDVQQMQATMRNI 213

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5JXA1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA1_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.050e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNI 213

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5KE37_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE37_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.410e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  134 GDGQAAFAQLKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFNVQQMQAVMRNI 236

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.870e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNI 213

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BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.890e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNI 213

[Close]

BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.920e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNI 213

[Close]

BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.920e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNI 213

[Close]

BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.940e-10
Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    3 GDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMDTARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKSAMRSM 105
            GDGQAA+  L+  Y+ V++   +   ++L +T M+ G++PDDF       R +L  MGE I+  RF D+ +   + DY  ++   FRD  F ++ +++ MR++
Sbjct:  111 GDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNI 213

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig13044.1837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K1J1_9PHAE	7.780e-20	46.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWF9_9PHAE	2.210e-14	54.29	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KMR7_9PHAE	2.550e-11	33.98	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JXA1_9PHAE	1.050e-10	33.01	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5KE37_9PHAE	1.410e-10	33.01	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KN28_9PHAE	1.870e-10	33.01	Uncharacterized protein (Fragment) n=3 Tax=Ectocar...	[more]
A0A6H5KJB9_9PHAE	1.890e-10	33.01	Uncharacterized protein (Fragment) n=2 Tax=Ectocar...	[more]
A0A6H5K4S9_9PHAE	1.920e-10	33.01	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JC59_9PHAE	1.920e-10	33.01	gag_pre-integrs domain-containing protein (Fragmen...	[more]
A0A6H5K3T5_9PHAE	1.940e-10	33.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 7..99 e-value: 1.2E-12 score: 47.6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig13044	contig	S-dermatodea_contig13044:257..574 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig13044.1837.1	mRNA_S-dermatodea_contig13044.1837.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig13044 257..574 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig13044.1837.1 ID=prot_S-dermatodea_contig13044.1837.1|Name=mRNA_S-dermatodea_contig13044.1837.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=106bp
GLGDGQAAWQVLEEKYDAVSNATRQELYEELAKTKMKQGQDPDDFLYIMD
TARDRLHDMGEHITSERFGDLLLNALTPDYDFVRNTSFRDRQFGLEDIKS
AMRSM*