prot_S-dermatodea_contig13002.1822.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13002.1822.1
Unique Nameprot_S-dermatodea_contig13002.1822.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length386
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig13002.1822.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.000e-16
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 0 
Query:   26 DIVMYLADFVDPKGYIFFAPVAKCWRKAWAERPTITAGITAHTTLSQLSFSFQGGRLPPSHRLCEAAASLGKLDLLRCARDFGCGWS 112
            DIV  + +FVD   Y+FFA V++ WR  W +RPT+T  +TA T++SQLS SF+ G L  +  +CE  A LG+LDLLR AR  GC W+
Sbjct:   10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECG-LRRTAAVCETVAGLGRLDLLRRARAMGCPWN 95
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13002.1822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMS7_ECTSI1.000e-1650.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 67..386
e-value: 3.2E-22
score: 80.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 116..379
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 84..276
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 278..385
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 278..385
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 84..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13002contigS-dermatodea_contig13002:3743..4900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13002.1822.1mRNA_S-dermatodea_contig13002.1822.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13002 3743..4901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13002.1822.1 ID=prot_S-dermatodea_contig13002.1822.1|Name=mRNA_S-dermatodea_contig13002.1822.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=386bp
RHTEQANSCYKFLMIAMASPIEEEEDIVMYLADFVDPKGYIFFAPVAKCW
RKAWAERPTITAGITAHTTLSQLSFSFQGGRLPPSHRLCEAAASLGKLDL
LRCARDFGCGWSLSVCSKAARRGHLEVLQWAHDNGCPWRQDTCASAARGG
YLAVLQWARTNGCPWDVGACIAAADGGHIEVVRWSVAHGCCLDELACASA
AKGGHQSILEELRAAGCPWNQLTCSWAAAGGHLDILRWARANDCEWNGCT
CNEAAASGRLDILRWARAEGCPWNTLTTMCAAEGGHLHILQWARARNCPW
DEKTCARAAFYGHLDVLQWARANGCPWNRETCAEAAVSGRLDVLQWARGN
GCPWDTTTCRAAAENGHLGVLQWARANGCPWDVETC
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf