prot_S-dermatodea_contig130.1821.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig130.1821.1
Unique Nameprot_S-dermatodea_contig130.1821.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length99
Homology
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BLAST of mRNA_S-dermatodea_contig130.1821.1 vs. uniprot
Match: D8LEM3_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM3_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 3.100e-33
Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0 
Query:    1 QGSNQVITLLGCGSGGLPELCSALNETLVAFCALRVAVAGQKAPRFHRIKFVGDEVGGMKKGRAALQKNAVFAVFEGASAGDHDFGSVDEL 91
            +GSN VI LLG G GG+ ELCS L +++VAFC +RV    + + RFHRI FVG+EVGGMKKGRAAL KNAVFAVFEGAS GDHDF SV++L
Sbjct:   49 EGSNSVIKLLGSGIGGVSELCSTLLDSMVAFCGVRVG-DDKGSARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDHDFSSVEDL 138
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BLAST of mRNA_S-dermatodea_contig130.1821.1 vs. uniprot
Match: A0A7S2V4Y3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Y3_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.670e-7
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:    1 QGSNQVITLLGCGSGGLPELCSALNETLVAFCALRVAVAGQKAPRFHRIKFVGDEVGGMKKGRAALQKNAVFAVFEGASA 80
            +G ++ + +   G+ G   + ++ +E  VAFC     V G K  +  R+ F+G+ VGGMK+G+A + KNAVF    G SA
Sbjct:   55 EGGSKKVVVKEIGNTGYDGMVASFSEDDVAFCGFSANVDGNK--KLFRVFFIGENVGGMKRGKAGMHKNAVFDKMPGCSA 132
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig130.1821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEM3_ECTSI3.100e-3368.13ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2V4Y3_9STRA1.670e-736.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 1..97
e-value: 3.4E-11
score: 44.9
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 7..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig130contigS-dermatodea_contig130:121..417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig130.1821.1mRNA_S-dermatodea_contig130.1821.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig130 121..417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig130.1821.1 ID=prot_S-dermatodea_contig130.1821.1|Name=mRNA_S-dermatodea_contig130.1821.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=99bp
QGSNQVITLLGCGSGGLPELCSALNETLVAFCALRVAVAGQKAPRFHRIK
FVGDEVGGMKKGRAALQKNAVFAVFEGASAGDHDFGSVDELASAAALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf