prot_S-dermatodea_contig12968.1801.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12968.1801.1
Unique Nameprot_S-dermatodea_contig12968.1801.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length161
Homology
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 7.110e-58
Identity = 108/159 (67.92%), Postives = 121/159 (76.10%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQWEAEEDAPPAEAAPVDDGGDVD-------QSLGGNRNKISKTTAKLKAKTPYSLKEKKEQEEVIRAKAEAKAARRRLLA 153
            +V+ DARDYADHAGR D+GM DVRLAVRKKQD+L+AGPP RED IRQADE+NRIPLP IPD+FGVRLPP QYQ TLPNLQWEA      AE    D+ G++D         L GNRNK +KTT  L+ K P +LKEKKEQEE  RAKAEAKAARRRL A
Sbjct:   30 EVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAH-----AEPPVHDEAGEMDVDPEQAPSPLSGNRNKKAKTTPGLETKKPLTLKEKKEQEEANRAKAEAKAARRRLQA 183          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: A0A4V1IWR4_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IWR4_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 1.570e-13
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQ 81
            DV  DA+ YADHAG+ D+ +DDV+LA++   ++   GPP RE +   A E N  PLP IP+ +G+RLPP QY  T  N Q
Sbjct:   38 DVFQDAQLYADHAGKRDVDLDDVQLAIQGIVNNSFTGPPPREFLTELAAEKNSAPLPLIPERYGIRLPPEQYCLTGANYQ 117          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 1.580e-13
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQ 81
            DV  DA  Y++HAGR D+G+DDVRLA++ + +     PP +E ++  A+E NR+PLP IP+++G+RLP  ++  T  N Q
Sbjct:   43 DVFQDALLYSEHAGRTDVGLDDVRLAIQGRVNHSFTSPPPKEFLLELAEEKNRVPLPLIPEKYGIRLPHERHCLTAVNFQ 122          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: F4P4F0_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4F0_BATDJ)

HSP 1 Score: 72.0 bits (175), Expect = 2.840e-13
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQ 81
            DV+ D++ +ADHAG  D+ +DD+RLA+  +      GPP RE ++  A++ N IPLP IP++FG+RLPP +   T  N Q
Sbjct:   37 DVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 116          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: F4R509_MELLP (Transcription initiation factor TFIID subunit 9 n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R509_MELLP)

HSP 1 Score: 72.8 bits (177), Expect = 1.000e-12
Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    1 MDVVCDARDYADHAGRVDIG----MDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQWEAEEDAPPAEAAPVDDGGDVDQSLGG 108
            +D++ DA  YADHAGR        ++DVRLAV+ K +   +GP  +E ++  AD +NR  LPPIP+ +G+RLPP + + T PN        AP A ++  D   + D+ + G
Sbjct:   60 VDILSDAMVYADHAGRAHAAHGPDVEDVRLAVQAKVEHSMSGPMSKEFLLNLADTLNRTSLPPIPERYGIRLPPEKDRLTAPNFDI-----APKAPSSTTDQPINADEDMFG 166          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: A0A177WG97_BATDL (Uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WG97_BATDL)

HSP 1 Score: 72.0 bits (175), Expect = 2.420e-12
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQ 81
            DV+ D++ +ADHAG  D+ +DD+RLA+  +      GPP RE ++  A++ N IPLP IP++FG+RLPP +   T  N Q
Sbjct:   51 DVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 130          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: UPI000644E8C7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E8C7)

HSP 1 Score: 73.2 bits (178), Expect = 2.940e-12
Identity = 37/95 (38.95%), Postives = 60/95 (63.16%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQWEAEEDAPPAEAAPV 96
            +V+ D+  Y++H+GR +I + D+RL+++ + +     PP RE ++  ++E NRIPLPPIP +FGV LPP +Y    PN Q +  +  P    AP+
Sbjct:  207 EVLQDSIAYSEHSGRSEIDISDIRLSIQSRVNFSFTQPPPRELLLSISEEKNRIPLPPIPQKFGVLLPPDEYCLNYPNYQVDPAKPKPAQHQAPL 301          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: A0A1S8VMC7_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VMC7_9FUNG)

HSP 1 Score: 71.6 bits (174), Expect = 3.230e-12
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQ 81
            DV+ D++ +ADHAG  ++ +DDVRLA+  +      GPP RE ++  A++ N IPLP IP++FG+RLPP +   T  N Q
Sbjct:   51 DVLQDSQVFADHAGHKELEVDDVRLAIESRVAHSFTGPPSRETMMELAEKKNSIPLPLIPEKFGLRLPPERNTLTKANFQ 130          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: U9T6J2_RHIID (Uncharacterized protein n=7 Tax=Glomeraceae TaxID=36751 RepID=U9T6J2_RHIID)

HSP 1 Score: 71.2 bits (173), Expect = 4.300e-12
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MDVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQ 81
            +DV+ DA  YA+HA + DI +DDV+LA++ +       PP +E + + A E NR PLPP+P+++G+RLPP ++  T  N Q
Sbjct:   52 VDVIQDASAYAEHAAKNDIDIDDVKLAIQGRITHSFTSPPRQEFLAQLAKERNREPLPPVPEKYGLRLPPDRHCLTAVNFQ 132          
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Match: A0A1Y2GSY7_9FUNG (Transcription initiation factor IID, 31kD subunit-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GSY7_9FUNG)

HSP 1 Score: 70.9 bits (172), Expect = 5.220e-12
Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = 0
Query:    2 DVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQADEINRIPLPPIPDEFGVRLPPPQYQTTLPNLQWEAEEDAPPAEAAPVDDGGDVDQSLGGNRNKISKTTAKLKAKTPYSLKEKKEQEE 136
            DV  DA  Y++HAGR ++G++DV+LA++ + +     PP +E ++  A+E N++PLP IP+++G+RLP  ++  T  N Q   E   PP+    +     +  S+GG     +   + L A+ P   K K E E+
Sbjct:   43 DVFQDALLYSEHAGRTEVGLEDVKLAIQGRVNHSFTSPPLKEFLLELAEEKNKVPLPLIPEKYGIRLPHERHCLTAVNFQLIPE--LPPSGVQRLSSDA-ISTSIGGRGVGEAPLASPLSAEPPSLFKVKSEDED 174          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12968.1801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI7.110e-5867.92Transcription initiation factor TFIID subunit n=2 ... [more]
A0A4V1IWR4_9FUNG1.570e-1348.75Transcription initiation factor TAFII31 n=1 Tax=Th... [more]
A0A197JZG0_9FUNG1.580e-1345.00TFIID-31kDa-domain-containing protein n=1 Tax=Linn... [more]
F4P4F0_BATDJ2.840e-1345.00Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
F4R509_MELLP1.000e-1238.39Transcription initiation factor TFIID subunit 9 n=... [more]
A0A177WG97_BATDL2.420e-1245.00Uncharacterized protein n=1 Tax=Batrachochytrium d... [more]
UPI000644E8C72.940e-1238.95hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1S8VMC7_9FUNG3.230e-1245.00Uncharacterized protein n=3 Tax=Batrachochytrium s... [more]
U9T6J2_RHIID4.300e-1243.21Uncharacterized protein n=7 Tax=Glomeraceae TaxID=... [more]
A0A1Y2GSY7_9FUNG5.220e-1233.33Transcription initiation factor IID, 31kD subunit-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..150
NoneNo IPR availablePANTHERPTHR12595POS9-ACTIVATING FACTOR FAP7-RELATEDcoord: 2..125
NoneNo IPR availablePANTHERPTHR12595:SF6TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 2..125
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..33
e-value: 3.8E-5
score: 25.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..29
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 2..80
e-value: 2.0E-16
score: 60.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12968contigS-dermatodea_contig12968:3801..5395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12968.1801.1mRNA_S-dermatodea_contig12968.1801.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12968 3190..5403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12968.1801.1 ID=prot_S-dermatodea_contig12968.1801.1|Name=mRNA_S-dermatodea_contig12968.1801.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=161bp
MDVVCDARDYADHAGRVDIGMDDVRLAVRKKQDSLAAGPPWREDIIRQAD
EINRIPLPPIPDEFGVRLPPPQYQTTLPNLQWEAEEDAPPAEAAPVDDGG
DVDQSLGGNRNKISKTTAKLKAKTPYSLKEKKEQEEVIRAKAEAKAARRR
LLAKASGKRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003162TFIID-31