prot_S-dermatodea_contig12936.1785.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12936.1785.1
Unique Nameprot_S-dermatodea_contig12936.1785.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length323
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig12936.1785.1 vs. uniprot
Match: D7G5A9_ECTSI (Vesicle docking protein P115 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A9_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.600e-55
Identity = 165/344 (47.97%), Postives = 205/344 (59.59%), Query Frame = 0 
Query:    7 QTSCASNGGLRLDPNFRPLLEKASEEVRRRVISIFTHGGGHVAGGDAAKA----------------------SPDPGKGSTGALDAASEGGLASMVEVQEREICRLREELSEAVSRLPRGGE----ITALEESLGDQVKELEETVSANSKKIGKLGAQLSEALGQASAEKERGDLLMSELQGLSITMGSLERQLLDRETVCDGLRRELDAGDDRSERELELTRQVEEARAHASGAEDALEQLQRQSMADAXXXXXXXXXXXXXXXXXXEAKWSARVEEVQAALEEARGEAKSAAGALAVAD---TALHGTASAELANTVEKLGDARKALQELEEKGEELERALV 321
            Q    +NG LRLDP F  LL +AS EVR+RVISI THG     GG AA +                                        GLASMVE+QE+EI  LREELSEA+SR+PRGG     ++ALE +L +QV++LE      S+   +L  +LS+AL Q  AEKE   LL SELQGL+++  SLERQLLDRE+VCDGLRR+LDAG+D S RE EL RQ+EEA + A  AE+ALE  Q+QS+A+A    XXXXXXXXXX     AKW A+VE++QAALEEAR +A        +AD   +    T SA+L    E L   RK+  E E K E++ RAL 
Sbjct:  756 QEGAGNNGELRLDPGFSSLLARASAEVRQRVISILTHGDASDGGGVAADSLETNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLASMVELQEKEIAGLREELSEALSRVPRGGGEGGGVSALEGALRNQVEQLEAAAVEQSEGFKRLQTELSDALAQVEAEKESLQLLTSELQGLAVSTSSLERQLLDRESVCDGLRRQLDAGEDSSAREGELARQLEEAHSRALKAEEALELSQKQSLANATADEXXXXXXXXXX-----AKWEAKVEQLQAALEEARRDAAXXXXXXXLADDDSSKAAATVSAQLVTATEDLESMRKSSVEREAKLEQIGRALA 1094
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12936.1785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5A9_ECTSI1.600e-5547.97Vesicle docking protein P115 n=2 Tax=Ectocarpus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..322
NoneNo IPR availableCOILSCoilCoilcoord: 249..276
NoneNo IPR availableCOILSCoilCoilcoord: 205..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12936contigS-dermatodea_contig12936:1697..4915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12936.1785.1mRNA_S-dermatodea_contig12936.1785.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12936 1695..4915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12936.1785.1 ID=prot_S-dermatodea_contig12936.1785.1|Name=mRNA_S-dermatodea_contig12936.1785.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=323bp
GPDGGDQTSCASNGGLRLDPNFRPLLEKASEEVRRRVISIFTHGGGHVAG
GDAAKASPDPGKGSTGALDAASEGGLASMVEVQEREICRLREELSEAVSR
LPRGGEITALEESLGDQVKELEETVSANSKKIGKLGAQLSEALGQASAEK
ERGDLLMSELQGLSITMGSLERQLLDRETVCDGLRRELDAGDDRSERELE
LTRQVEEARAHASGAEDALEQLQRQSMADAAADEAAADEAAREATLEAEA
KWSARVEEVQAALEEARGEAKSAAGALAVADTALHGTASAELANTVEKLG
DARKALQELEEKGEELERALVKN
back to top