prot_S-dermatodea_contig128.1713.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig128.1713.1
Unique Nameprot_S-dermatodea_contig128.1713.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length213
Homology
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A6H5L7W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W2_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 4.470e-119
Identity = 171/195 (87.69%), Postives = 184/195 (94.36%), Query Frame = 0
Query:    4 QVHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSR 198
            QVHKRQEKN++LRHLRNV +E+TPGL+ADFVLGPK CAVFISLRYHLLYPHYLIQRIKELS HFTLRVLLCHVDVDDSE PLL+INKMAV NDFT +LAWSLQEA RYLETYKAYE KSADSIQEKVDDD+L KLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDA+A EL+LCPGLG+KKV+RI+EALHEPL R
Sbjct:   82 QVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRIKELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVSRIHEALHEPLVR 276          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: D7G4P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P9_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 2.890e-81
Identity = 130/161 (80.75%), Postives = 141/161 (87.58%), Query Frame = 0
Query:   52 YPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSR---TLRRKRSRPEG 209
            +PH  +Q   ELS HFTLRVLLCHVDVDDSE PLL+INKMAV NDFT +LAWSLQEA RYLETYKAYE KSADSIQEKVDDD+L KLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDA+A EL+LCPGLG+KKVARI+EALHEPL R   + R KR+R EG
Sbjct:    5 HPHIFMQ---ELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG 162          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A1D1ZHX7_9ARAE (DNA excision repair protein ERCC-1 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZHX7_9ARAE)

HSP 1 Score: 218 bits (555), Expect = 1.630e-67
Identity = 102/195 (52.31%), Postives = 145/195 (74.36%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRT 199
            V  RQ+ N +L+H+RNV +     ++ D++LG  +CA++ISLRYHLL+P Y+  RI+EL ++F LRV+LCH+DV+D  KPLL++ + A+L+D + +  WSL+E GRYLET K YE KSADSI+E++D DYL++L      +R VNK+DV+TL S FGSL  + DAS +ELA CPG+G++KV R+Y+  HEP  RT
Sbjct:   18 VSHRQKGNPLLKHIRNVRWTFA-DVVCDYLLGQNSCALYISLRYHLLHPDYVYYRIRELQKNFKLRVVLCHIDVEDVAKPLLEVTRTALLHDCSLLCGWSLEECGRYLETIKVYENKSADSIREQMDTDYLSRLTHALTTIRHVNKTDVVTLGSAFGSLSRIMDASMEELARCPGIGERKVQRLYDTFHEPFRRT 211          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A835LMH1_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LMH1_9MAGN)

HSP 1 Score: 219 bits (558), Expect = 7.150e-67
Identity = 103/196 (52.55%), Postives = 145/196 (73.98%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTL 200
            V  RQ+ N +L+H+RNV + +   ++ D++LG  +CA+++SLRYHLL+P YL  RIKEL ++F LRV+LCHVDV+D  KP+L++ K A+L+D T + AWSL+E GRYLET K YE K AD +Q ++D DYL++L      VR VNK+DV+TL SNFGSL  + D+S ++LA CPG+G+KKV R+Y+  HEP  R +
Sbjct:  103 VSHRQKGNPLLKHIRNVKW-LFADIICDYLLGQNSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPILEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAV 297          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: UPI000CE1FCD7 (DNA excision repair protein ERCC-1-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1FCD7)

HSP 1 Score: 216 bits (551), Expect = 1.410e-66
Identity = 104/204 (50.98%), Postives = 147/204 (72.06%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTLRRKRSRPE 208
            V  RQ+ N +L+H+RNV +     ++ D++LG  +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDV+D  KPLL++ K A+L+D T + AWSL+E GRYLET K YE K AD IQ ++D DYL++L      VR VNK+DV+TL + FGSL  + DAS ++LA CPG+G++KV R+Y+  HEP  R +  + + PE
Sbjct:   47 VSHRQKGNPLLKHIRNVRWAFA-DIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVAKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHALTTVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVASRPAVPE 249          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A2G3A240_CAPAN (DNA excision repair protein ERCC-1 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3A240_CAPAN)

HSP 1 Score: 218 bits (555), Expect = 1.910e-66
Identity = 103/204 (50.49%), Postives = 148/204 (72.55%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTLRRKRSRPE 208
            V  RQ+ N +L+H+RNV +     ++ D++LGP  CA+++SLRYHLL+P YL  RI+EL ++F LR++LCHVDV+D  KPLL++ + ++L+D T +  WSL+E GRYLET K YE K AD IQ ++D DYL++L      +R VNK+DV+TL S FGSL  V DAS ++LA CPG+G++KV R+Y+A HEP  R + +++  PE
Sbjct:   99 VSNRQKGNPLLKHIRNVRWAFA-DIVCDYLLGPNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIVLCHVDVEDVVKPLLEVTRTSLLHDCTLLCGWSLEECGRYLETVKVYENKPADLIQGQMDGDYLSRLNHALTAIRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRLYDAFHEPFKREVPKRQCIPE 301          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A3S4NRY1_9MAGN (DNA excision repair protein ERCC-1 isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4NRY1_9MAGN)

HSP 1 Score: 218 bits (554), Expect = 2.000e-66
Identity = 104/196 (53.06%), Postives = 145/196 (73.98%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTL 200
            V  RQ+ N +L+H+RNV + +   +L D++LG  +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDV+D  KPLL++ + A+L+D T +  WSL+E GRYLET K YE K ADSIQE++D DYL++L      VR VNK+DV+TL S FGSL  + DAS ++LA CPG+G++KV R+Y+  HEP  R +
Sbjct:  107 VSHRQKGNPLLKHIRNVRW-MFADVLCDYLLGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKVYENKPADSIQERMDTDYLSRLTHALTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFRRVV 301          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A022QX06_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QX06_ERYGU)

HSP 1 Score: 218 bits (554), Expect = 2.420e-66
Identity = 104/196 (53.06%), Postives = 145/196 (73.98%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTL 200
            V  RQ+ N +L+H+RNV +     ++ D++LG  +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDV+D  KPLL++ K A+L+D T + AWSL+E GRYLET K YE KSA+ IQ ++D DYL++L +    VR VNK+DV+TL S FGSL  + DAS D+LA CPG+G++KV R+Y+  HEP  R +
Sbjct:  103 VSNRQKGNPLLKHIRNVRWAFA-DIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSAELIQGQMDMDYLSRLNNALTSVRHVNKTDVVTLGSTFGSLSNIMDASVDDLARCPGIGERKVKRLYDTFHEPFKRVV 297          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A5C7I906_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I906_9ROSI)

HSP 1 Score: 218 bits (555), Expect = 2.440e-66
Identity = 106/204 (51.96%), Postives = 147/204 (72.06%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTLRRKRSRPE 208
            V  RQ+ N +L+H+RNV +     ++ D++LG  +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCH+DVDD  KPLL++ K A+L+D T + AWSL+E GRYLET K YE K AD IQ ++D DYL++L      VRSVNK+DV+TL S FGSL  + DAS ++LA CPG+G++KV R+++  HEP  R +    S PE
Sbjct:  105 VSHRQKGNPLLKHIRNVRWAFA-DVVCDYMLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHIDVDDVVKPLLEVTKTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDSDYLSRLTHSLTTVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLHDTFHEPFKRVVTSHPSVPE 307          
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Match: A0A2J6KZK7_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KZK7_LACSA)

HSP 1 Score: 217 bits (552), Expect = 3.120e-66
Identity = 103/204 (50.49%), Postives = 149/204 (73.04%), Query Frame = 0
Query:    5 VHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFILAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTLRRKRSRPE 208
            V  RQ+ N +L+H+RNV +     +++D+VLG ++CA+++S+RYHLL+P YL  RI+EL ++F LRV+LCH+DV+D  KPLL++ + A+L+D T +  WSL+E GRYLET K YE K AD IQ ++D DYL++L      VR VNK+DV+TL S FGSL  + DAS ++LA CPG+G++KV R+Y+  HEP  RT+ ++   PE
Sbjct:  112 VSHRQKGNPLLKHIRNVRWAFA-DVVSDYVLGQQSCALYLSIRYHLLHPDYLYFRIRELGKNFKLRVVLCHIDVEDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKVYENKPADFIQGQMDTDYLSRLSHALTSVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRTVSKQHPPPE 314          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig128.1713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7W2_9PHAE4.470e-11987.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4P9_ECTSI2.890e-8180.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1D1ZHX7_9ARAE1.630e-6752.31DNA excision repair protein ERCC-1 n=1 Tax=Anthuri... [more]
A0A835LMH1_9MAGN7.150e-6752.55Uncharacterized protein n=2 Tax=Coptis chinensis T... [more]
UPI000CE1FCD71.410e-6650.98DNA excision repair protein ERCC-1-like n=1 Tax=Qu... [more]
A0A2G3A240_CAPAN1.910e-6650.49DNA excision repair protein ERCC-1 n=4 Tax=Capsicu... [more]
A0A3S4NRY1_9MAGN2.000e-6653.06DNA excision repair protein ERCC-1 isoform X1 n=1 ... [more]
A0A022QX06_ERYGU2.420e-6653.06Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A5C7I906_9ROSI2.440e-6651.96Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
A0A2J6KZK7_LACSA3.120e-6650.49Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.20coord: 118..205
e-value: 3.3E-28
score: 99.1
NoneNo IPR availablePFAMPF14520HHH_5coord: 147..193
e-value: 6.6E-8
score: 33.0
NoneNo IPR availableGENE3D3.40.50.10130coord: 3..117
e-value: 1.7E-41
score: 142.5
NoneNo IPR availablePRODOMPD013585coord: 5..126
e-value: 4.0E-32
score: 344.0
IPR004579ERCC1/RAD10/SWI10 familyTIGRFAMTIGR00597TIGR00597coord: 5..113
e-value: 1.2E-35
score: 119.7
IPR004579ERCC1/RAD10/SWI10 familyPFAMPF03834Rad10coord: 4..116
e-value: 1.8E-38
score: 131.1
IPR004579ERCC1/RAD10/SWI10 familyPANTHERPTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1coord: 5..205
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 91..202
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 4..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig128contigS-dermatodea_contig128:24284..25509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig128.1713.1mRNA_S-dermatodea_contig128.1713.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig128 24284..25509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig128.1713.1 ID=prot_S-dermatodea_contig128.1713.1|Name=mRNA_S-dermatodea_contig128.1713.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=213bp
MPWQVHKRQEKNAILRHLRNVPYEVTPGLLADFVLGPKACAVFISLRYHL
LYPHYLIQRIKELSRHFTLRVLLCHVDVDDSEKPLLDINKMAVLNDFTFI
LAWSLQEAGRYLETYKAYEQKSADSIQEKVDDDYLAKLQDCFGVVRSVNK
SDVLTLASNFGSLKAVCDASADELALCPGLGDKKVARIYEALHEPLSRTL
RRKRSRPEGGNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004579ERCC1/RAD10/SWI10
IPR010994RuvA_2-like
IPR011335Restrct_endonuc-II-like