prot_S-dermatodea_contig1276.1687.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1276.1687.1
Unique Nameprot_S-dermatodea_contig1276.1687.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length160
Homology
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BLAST of mRNA_S-dermatodea_contig1276.1687.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.200e-36
Identity = 82/133 (61.65%), Postives = 97/133 (72.93%), Query Frame = 0 
Query:   15 ISDAAVRFRKGDTGGAVKAAAALIERHPTNRRVLHTALSLGALAGNVPLVKSACRSLQVLPKRSSTSDPDGHRART-LAEEALWASHLAMRAAGAPDSRSRRELCKAVHTAPASIRSWTRLGAFTADSAASTD 146
            IS AAVR+ +GD  GA  AA   + + P +RRVLHT +SL ALAG+  LV+ A R+LQ LPKR+++SDP G  AR   AEE LWA HLAMRA G PDS SRR L KAVH +P+SI SW RLGA TADSAA+TD
Sbjct: 1247 ISGAAVRYLRGDASGAAAAAGTFMAQRPGDRRVLHTVVSLAALAGDSGLVQQASRALQTLPKRATSSDPGGSLARQHAAEEDLWAIHLAMRATGVPDSESRRALLKAVHLSPSSITSWARLGAATADSAAATD 1379
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1276.1687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G059_ECTSI1.200e-3661.65Similar to Tetratricopeptide repeat protein 37 (TP... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1276contigS-dermatodea_contig1276:17339..18986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1276.1687.1mRNA_S-dermatodea_contig1276.1687.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1276 17339..18986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1276.1687.1 ID=prot_S-dermatodea_contig1276.1687.1|Name=mRNA_S-dermatodea_contig1276.1687.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=160bp
MQAPAQGVQGVGRAISDAAVRFRKGDTGGAVKAAAALIERHPTNRRVLHT
ALSLGALAGNVPLVKSACRSLQVLPKRSSTSDPDGHRARTLAEEALWASH
LAMRAAGAPDSRSRRELCKAVHTAPASIRSWTRLGAFTADSAASTDRSPL
GDGNGTAPSC
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