prot_S-dermatodea_contig1273.1671.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1273.1671.1
Unique Nameprot_S-dermatodea_contig1273.1671.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length144
Homology
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BLAST of mRNA_S-dermatodea_contig1273.1671.1 vs. uniprot
Match: D8LCH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH2_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.000e-51
Identity = 95/146 (65.07%), Postives = 112/146 (76.71%), Query Frame = 0 
Query:    4 LTLPSVEPLLYVPVPAIAELVANRSEAEVLLRIGMLAHEFDHLMTYLAQWLEHQQ------CLRVDCLPADGESGSQASSLAPLTYQARLANRHGVKALQQRVTECLQKLQRHMDAVQVYANQNASFAQELRLCGLGARADQRRRL 143
            L LP  EPLL+VPV AI E V+NRSEAEVLLRIG L HEFDHL   L QWLEH+Q      CL+ +  P +    S   SL PL +QAR+ NRHGV+ LQ+++TECLQ+LQR+MDAVQV+ANQNASF+QELRLCGLG RA+QRRRL
Sbjct:    6 LRLPRAEPLLHVPVSAIVEFVSNRSEAEVLLRIGDLGHEFDHLTRTLVQWLEHEQHLTADGCLQEEQQPVEDSGESLVLSLVPLAHQARVVNRHGVRVLQEKITECLQQLQRYMDAVQVFANQNASFSQELRLCGLGDRAEQRRRL 151
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BLAST of mRNA_S-dermatodea_contig1273.1671.1 vs. uniprot
Match: A0A6H5JFN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN0_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.470e-47
Identity = 98/163 (60.12%), Postives = 115/163 (70.55%), Query Frame = 0 
Query:    2 DR-LTLPSVEPLLYVPVPAIAELVANRSEAEVLLRIGMLAHEFDHLMTYLAQWLEHQQ------CLRVDCLPADGESGSQASSLAPLTYQARLANRHGVKALQQRVTECLQKLQRHM--------------DAVQVYANQNASFAQELRLCGLGARADQRRRL 143
            DR L LP  EPLL+VPV AI E V+NRSEAEVLLRIG L HEFDHL   L QWLEH+Q      CL+ +  PA+    S   SL PL +QAR+ NRHGV+ LQQ++TECLQ+LQR+M              DAVQV+A+QNASF+QELRLCGLG RA+QRRRL
Sbjct:   23 DRALRLPRAEPLLHVPVSAIVEFVSNRSEAEVLLRIGDLGHEFDHLTRTLVQWLEHEQHLTADGCLQEEQQPAEDTGESLVLSLVPLAHQARVVNRHGVRVLQQKITECLQQLQRYMVGVVQGDGFGKWTMDAVQVFADQNASFSQELRLCGLGDRAEQRRRL 185
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1273.1671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCH2_ECTSI2.000e-5165.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFN0_9PHAE5.470e-4760.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1273contigS-dermatodea_contig1273:14199..15715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1273.1671.1mRNA_S-dermatodea_contig1273.1671.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1273 14187..15715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1273.1671.1 ID=prot_S-dermatodea_contig1273.1671.1|Name=mRNA_S-dermatodea_contig1273.1671.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=144bp
MDRLTLPSVEPLLYVPVPAIAELVANRSEAEVLLRIGMLAHEFDHLMTYL
AQWLEHQQCLRVDCLPADGESGSQASSLAPLTYQARLANRHGVKALQQRV
TECLQKLQRHMDAVQVYANQNASFAQELRLCGLGARADQRRRL*
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