prot_S-dermatodea_contig12479.1536.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12479.1536.1
Unique Nameprot_S-dermatodea_contig12479.1536.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length219
Homology
BLAST of mRNA_S-dermatodea_contig12479.1536.1 vs. uniprot
Match: D7G5S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S9_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.910e-88
Identity = 131/205 (63.90%), Postives = 165/205 (80.49%), Query Frame = 0
Query:   15 MAIMRVHRR-GEPKQRECSCLGYTHIMSSFRRTETSNIADLEADTEGGSVTLRTYGPYRSGYGRLGEFPNLPPILIIGTGAGAALVLDFVAYVRANSLTPMRPVTVCYSSASLALLQFVTNTLLAEKLPGVRIMTALTRHDDLELFNTKAEAKDDLAIGRLDVMSIVNSVSDDTEVYFCGGGGVNVMLRKSCAERGMKYAGSAVQ 218
            MAI+R++RR  +     C+C+G T +++ FR  ET++IAD+E   +  ++ LR YGPYRS YGRL EFPNLPP+LII TGAGA LVLDFV +VRA  +TP RPV VCYSSASLALLQFVTNTLLAE+ PG+++ TALTRH++LE+FNT  + K +L IGRLDV SI+  VS+DTEVYFCGGGG+N +LR++CA+RGMKY GSAVQ
Sbjct:    1 MAIVRLNRRTSQSSPCACTCIGLTWVLNIFRTPETASIADVEETNDLETIPLRVYGPYRSEYGRLEEFPNLPPLLIIATGAGAGLVLDFVGFVRAKKITPKRPVKVCYSSASLALLQFVTNTLLAERTPGIQVETALTRHEELEMFNTTNQPKPELVIGRLDVKSIIRGVSEDTEVYFCGGGGINTLLREACAKRGMKYVGSAVQ 205          
BLAST of mRNA_S-dermatodea_contig12479.1536.1 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 8.930e-85
Identity = 133/215 (61.86%), Postives = 171/215 (79.53%), Query Frame = 0
Query:    4 VDTLAGGAWDKMAIMRVHRRGEPKQRECSCLGYTHIMSSFRRTETSNIADLEADTEGGSVTLRTYGPYRSGYGRLGEFPNLPPILIIGTGAGAALVLDFVAYVRANSLTPMRPVTVCYSSASLALLQFVTNTLLAEKLPGVRIMTALTRHDDLELFNTKAEAKDDLAIGRLDVMSIVNSVSDDTEVYFCGGGGVNVMLRKSCAERGMKYAGSAVQ 218
            ++T+  G+W KMAI++V+RR   K  +CSC+G T I+S FR  ETS+IADLEA      + LRTYGPYRS YGRL EFP+LPP+LI+ TGAGAALVLDF+ YVRAN++ P+RPV+VCYSSASLALLQFVTNTLLAE+ PG+ I TALTRH+DLE+ ++    + +L +GRLD+  I+  VS +TEVYFCGGGG+N +LR++C  RG+KY GS+VQ
Sbjct:  638 LETVEAGSWSKMAIVKVNRRTS-KASKCSCMGLTFILSIFRDPETSSIADLEAAQRNAPLQLRTYGPYRSEYGRLAEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVCYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLEIVDSANGPEPELVMGRLDIKKIIGEVSQETEVYFCGGGGINALLRETCTRRGIKYVGSSVQ 851          
BLAST of mRNA_S-dermatodea_contig12479.1536.1 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 3.390e-84
Identity = 131/213 (61.50%), Postives = 170/213 (79.81%), Query Frame = 0
Query:    6 TLAGGAWDKMAIMRVHRRGEPKQRECSCLGYTHIMSSFRRTETSNIADLEADTEGGSVTLRTYGPYRSGYGRLGEFPNLPPILIIGTGAGAALVLDFVAYVRANSLTPMRPVTVCYSSASLALLQFVTNTLLAEKLPGVRIMTALTRHDDLELFNTKAEAKDDLAIGRLDVMSIVNSVSDDTEVYFCGGGGVNVMLRKSCAERGMKYAGSAVQ 218
            T+  G+W KMAI++V+RR   K ++CSC+G T I+  FR  ETS+IADLEA     +  LRTYGPYRS YGRL EFP+LPP+LI+ TGAGAALVLDF+ YVRAN++ P+RPV+V YSSASLALLQFVTNTLLAE+ PG+ I TALTRH+DL++ +  +  + +L +GRLD+ +I+  VS +TEVYFCGGGG+N +LR++CA RG+KY GS+VQ
Sbjct:  416 TIQAGSWSKMAIVKVNRRTS-KAKKCSCMGLTFILRIFRDPETSSIADLEAAQRNPTFELRTYGPYRSEYGRLVEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVYYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLQIVDEASGPEPELVMGRLDIKNIIGEVSQETEVYFCGGGGINALLRETCARRGIKYVGSSVQ 627          
BLAST of mRNA_S-dermatodea_contig12479.1536.1 vs. uniprot
Match: A0A6H5JCC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCC2_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 7.210e-41
Identity = 91/224 (40.62%), Postives = 119/224 (53.12%), Query Frame = 0
Query:   34 LGYTHIMSSFRRTETSNIADLEADTEGGSVTLRTYGPYRSGYGRLGEFPNLPPILIIGTGAGAALVLDFVAYVRANSLTPMRPVTVCYSSASLALLQFVTNTLLAEKLPGVRIMTALTRHDDLELFNTKAEAKDDLAIGRLDV---------------------------------------MSIVNSVSDDTEVYFCGGGGVNVMLRKSCAERGMKYAGSAVQ 218
            +G T I+S FR   TS+I +LEA     +  LRT+GPYRS YGRL EFP+LPP+L        A+   F  Y               +SSASLALLQFVTNTLLAE+ PG+ I TALTRH+D+++    +  + +L +G LD+                                        +I+  VS +TEVYFCGGGGVN  L ++CA RG+KY G +VQ
Sbjct:    1 MGLTFILSIFRDPVTSSIPELEAAQRNPTFQLRTFGPYRSEYGRLVEFPHLPPLL---GQQHCAIAAGFGVY---------------HSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDVQIVGDTSGPEPELVMGHLDIKHDTTDSNSLFAGYVRRYDKFVNPRWRALPLVFACLVLPQTIIGEVSQETEVYFCGGGGVNAPLCETCARRGIKYVGRSVQ 206          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12479.1536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5S9_ECTSI1.910e-8863.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5T0_ECTSI8.930e-8561.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCP9_ECTSI3.390e-8461.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCC2_9PHAE7.210e-4140.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039261Ferredoxin-NADP reductase (FNR), nucleotide-binding domainGENE3D3.40.50.80coord: 85..214
e-value: 9.1E-7
score: 31.1
IPR039261Ferredoxin-NADP reductase (FNR), nucleotide-binding domainSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 84..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..218
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
NoneNo IPR availableTMHMMTMhelixcoord: 84..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12479contigS-dermatodea_contig12479:455..3894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12479.1536.1mRNA_S-dermatodea_contig12479.1536.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12479 419..4710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12479.1536.1 ID=prot_S-dermatodea_contig12479.1536.1|Name=mRNA_S-dermatodea_contig12479.1536.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=219bp
MEAVDTLAGGAWDKMAIMRVHRRGEPKQRECSCLGYTHIMSSFRRTETSN
IADLEADTEGGSVTLRTYGPYRSGYGRLGEFPNLPPILIIGTGAGAALVL
DFVAYVRANSLTPMRPVTVCYSSASLALLQFVTNTLLAEKLPGVRIMTAL
TRHDDLELFNTKAEAKDDLAIGRLDVMSIVNSVSDDTEVYFCGGGGVNVM
LRKSCAERGMKYAGSAVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039261FNR_nucleotide-bd