prot_S-dermatodea_contig12295.1436.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12295.1436.1
Unique Nameprot_S-dermatodea_contig12295.1436.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length479
Homology
BLAST of mRNA_S-dermatodea_contig12295.1436.1 vs. uniprot
Match: A0A6H5JIJ8_9PHAE (Vacuolar protein sorting-associated protein 51 homolog (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ8_9PHAE)

HSP 1 Score: 453 bits (1165), Expect = 6.050e-148
Identity = 311/585 (53.16%), Postives = 350/585 (59.83%), Query Frame = 0
Query:    1 NRQDVSRDTLVSHADLLLRLGVDPAGLKERYLEAHRRQLHAFLSASKRALVEDRSVSLDACLGKLAEGFLPMLLRTVQIYAQLFQQXXXXXXNGNKSDKR-----QLAPKTSSEGVEKGRSNGTDAAATPAPASENQAGLVALVQSSVDSFFDLLYAKVDHSLNA-----EPRQRAPSEAGAGAGASGDHXXXXXXXXXXXXXXXXEGGELDPVALGGVVAAVQQLVSDIETVDPHVPQAQLGRRAKEFAQGFKRGQVRRSFRVLCRSSFAVATSLVNAIRDGTPPEELLEDALEGG-PGGNWGGAAFGSRHNPASAARRK-------------GQYPALVDRALETLLKV------------------------------------------------------------------------ADGIVSSARPLSRLDSTPAPLLEELRFGLWGVVLWLASALGIVAGVTPDASA-ENLPSAEGREYEQALEAEWGGRAIAALREPLPN------------AEQVSSPATVSRAEGEGXXXXXXXXXXXXXXXXDGEVALLLACLCRGLGTTFVVRVPEILSRSV 476
            N  DVSRDTLVSHADLLL+LGVDPAGLKERYL+AHRRQL AFL AS  ALVEDRSVSLDACLGKLAEGFLPMLLRTVQ+Y QLF+Q          S        Q  P+T  +G +K     T A A      +  AGL++LVQ+SV  FFDLLYAKVD SL+A     +PR  APSEAGAG       XXXXXXXXXXXXXXXX   +LDPVALGGVVAAVQQLV+DIETVDPHVPQ QL RRAK+FAQ FK GQVRR+FRVLCR+S +V TS+VNA+R GTPPE++L DAL+ G PG   GG                             G+YPALVDRAL TL+K                                                                         AD IVS  RPLSRLDS+P PL EELRFGLWGVVLWLASALGIVAGVT  +S+ ++LP AEGREY +ALE EWG RA++ALREPLP+            AE V+  A      G                  +GEV+LLLACLCRGL TTFVVRVPEIL R +
Sbjct:  240 NSSDVSRDTLVSHADLLLQLGVDPAGLKERYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFEQTGAPSTPSASSTPAPPTATQAPPETKQQGHQKDGDTATTAVANGQD-KKTHAGLISLVQTSVGRFFDLLYAKVDQSLDANSSNPQPRSHAPSEAGAGEAGKKXXXXXXXXXXXXXXXXXXXXXDLDPVALGGVVAAVQQLVTDIETVDPHVPQVQLARRAKDFAQEFKSGQVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDILADALDTGYPGAAGGGMXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRYPALVDRALGTLMKARQTDRQTICLASLYPLAPDLPLKPLPHVASPPPPXXXXXXXXXXXPPPPFWSSPSSSFRFVTRFFVLWCWQRADEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASALGIVAGVTGGSSSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSXXXXXXXXXKAAAEAVAGTAXXXXXAG-------VSVDDVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQI 816          
BLAST of mRNA_S-dermatodea_contig12295.1436.1 vs. uniprot
Match: D8LRL8_ECTSI (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL8_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 3.330e-143
Identity = 290/498 (58.23%), Postives = 328/498 (65.86%), Query Frame = 0
Query:    1 NRQDVSRDTLVSHADLLLRLGVDPAGLKERYLEAHRRQLHAFLSASKRALVEDRSVSLDACLGKLAEGFLPMLLRTVQIYAQLFQQXXXXXXNGNKSDKRQLAPKTSSEGVEKGRSNGTDAAATPAPASENQAGLVALVQSSVDSFFDLLYAKVDHSLNA-----EPRQRAPSEAGAGA-GASGDHXXXXXXXXXXXXXXXXEGGELDPVALGGVVAAVQQLVSDIETVDPHVPQAQLGRRAKEFAQGFKRGQVRRSFRVLCRSSFAVATSLVNAIRDGTPPEELLEDALEGGPGGNWGGAAFGS--RHNP------------ASAARRKGQYPALVDRALETLLKVADGIVSSARPLSRLDSTPAPLLEELRFGLWGVVLWLASALGIVAGVTPDASA-ENLPSAEGREYEQALEAEWGGRAIAALREPLPN-AEQVSSPATVSRAEGEGXXXXXXXXXXXXXXXXDGEVALLLACLCRGLGTTFVVRVPEILSRSV 476
            N  DVSRDTLVSHADLLL+LGVDPAGLKERYL+AHRRQL AFL AS  ALVEDRSVSLDACLGKLAEGFLPMLLRTVQ+Y QLF++          S                         AT A A +   GL+ALVQ+SV  FFDLLYAKVD SL+A     +PR   PSEAGAGA G   +  XXXXXXXXXXXXXXX   +LDPVALGGVVAAVQQLV+DIETVDPHVP                  QVRR+FRVLCR+S +V TS+VNA+R GTPPE++L D L+ G  G  GG   G+  RH              A  +   G+YPALVDRAL TL+K AD IVS  RPLSRLDS+P PL EELRFGLWGVVLWLASA GIVAGVT  AS+ ++LP AEGREY +ALE EWG RA++ALREPLP+ +    +                           +GEV+LLLACLCRGL TTFVVRVPEIL R +
Sbjct:  240 NSSDVSRDTLVSHADLLLQLGVDPAGLKERYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFERTGALPTPSASSTPAPXXXXXXXXXXXXXXXXXXXXXATTAVAKKTHTGLIALVQASVGRFFDLLYAKVDQSLDANSSNPQPRSHVPSEAGAGAAGKKSEGRXXXXXXXXXXXXXXXXXXDLDPVALGGVVAAVQQLVTDIETVDPHVP------------------QVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDVLADGLDTGHPGAAGGGMTGASGRHGXXXXXXXXXXXXXAGGSGEGGRYPALVDRALGTLMKRADEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASAFGIVAGVTGGASSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSPSPDTKAXXXXXXXXXXXEEEAAVSGDEVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQI 719          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12295.1436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIJ8_9PHAE6.050e-14853.16Vacuolar protein sorting-associated protein 51 hom... [more]
D8LRL8_ECTSI3.330e-14358.23Vacuolar protein sorting-associated protein 51 hom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 375..478
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12295contigS-dermatodea_contig12295:972..6579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12295.1436.1mRNA_S-dermatodea_contig12295.1436.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12295 972..6579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12295.1436.1 ID=prot_S-dermatodea_contig12295.1436.1|Name=mRNA_S-dermatodea_contig12295.1436.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=479bp
NRQDVSRDTLVSHADLLLRLGVDPAGLKERYLEAHRRQLHAFLSASKRAL
VEDRSVSLDACLGKLAEGFLPMLLRTVQIYAQLFQQQQQQQQNGNKSDKR
QLAPKTSSEGVEKGRSNGTDAAATPAPASENQAGLVALVQSSVDSFFDLL
YAKVDHSLNAEPRQRAPSEAGAGAGASGDHHHQQQQQQQGGGAGGGEGGE
LDPVALGGVVAAVQQLVSDIETVDPHVPQAQLGRRAKEFAQGFKRGQVRR
SFRVLCRSSFAVATSLVNAIRDGTPPEELLEDALEGGPGGNWGGAAFGSR
HNPASAARRKGQYPALVDRALETLLKVADGIVSSARPLSRLDSTPAPLLE
ELRFGLWGVVLWLASALGIVAGVTPDASAENLPSAEGREYEQALEAEWGG
RAIAALREPLPNAEQVSSPATVSRAEGEGGEGGGGGGGGPGGGGADGEVA
LLLACLCRGLGTTFVVRVPEILSRSVLE*
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