prot_S-dermatodea_contig12234.1400.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12234.1400.1
Unique Nameprot_S-dermatodea_contig12234.1400.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length115
Homology
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BLAST of mRNA_S-dermatodea_contig12234.1400.1 vs. uniprot
Match: A0A2V0NYS1_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYS1_9CHLO)

HSP 1 Score: 51.6 bits (122), Expect = 2.970e-5
Identity = 23/31 (74.19%), Postives = 24/31 (77.42%), Query Frame = 0 
Query:    1 AREHQCAWDEDTCYAAAGGGHLAVLEWARGQ 31
            AR   CAW EDTC  AAGGGHLAVL+WAR Q
Sbjct:  135 ARALGCAWGEDTCSFAAGGGHLAVLQWARAQ 165
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12234.1400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V0NYS1_9CHLO2.970e-574.19Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..115
e-value: 1.5E-7
score: 32.3
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 3..38
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 3..38
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 39..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12234contigS-dermatodea_contig12234:4354..4698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12234.1400.1mRNA_S-dermatodea_contig12234.1400.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12234 4354..4698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12234.1400.1 ID=prot_S-dermatodea_contig12234.1400.1|Name=mRNA_S-dermatodea_contig12234.1400.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=115bp
AREHQCAWDEDTCYAAAGGGHLAVLEWARGQGCPWSPDVCRAAAEGGHLE
VLQWLRKKGCPWDSGTCSGAAKCGHLQVLRWARGQGCPWDEVTCSRAASR
GHLGVLQWLRAAGCP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf