prot_S-dermatodea_contig12200.1379.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12200.1379.1
Unique Nameprot_S-dermatodea_contig12200.1379.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length677
Homology
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Match: D8LSB6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB6_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 3.270e-117
Identity = 232/531 (43.69%), Postives = 282/531 (53.11%), Query Frame = 0
Query:    1 RWIVCGDVGLRFVPELMGHANLQLPSHLRSWTDAARACAREADLQN------------------------------------GWDVTSGQMNPSPKKPNLNS--PNSGLGGMLKFLGAPREKLPYNHTRRGAQTVSGLAQCVACLVRAGVPLPITARVTQTWGAAGAFEGTRLTAIPVVLPPGVLPVASSQFDTEAPP----VARAGGGERPPSQGRGPVGTLVGAAGAXXXXXXXXXXXXXXXAGGSPRPERRDKKKR---------------------------------SKKDRSPGKRAADGAATGAIGQGGAVVGSGLDGNGAGXXXXXXXXXXXXXXXXXXXXXXAMPEWRQSNPVVPLSADYLDYYVRETERKYYKSAGILPYRHDPVTGEVWILLGSEVRKNKLVLSCLAGKREDKDAGPEHTAWREFWEESGKVLSEVDRAAFLTSCYEGRARAMWIQSAKMAVLTCEFSSPAIVDLPRLYAVGGRDVDKSDTSMLALHWVSATELHRACHLRGGKVVVWGP 456
            RW+V    G   +PEL+G   LQLP HLRSWTDAAR C  EA+  N                                        ++G  +   KKP +    P SGL GMLKFLG P+E    + TRRG   V  LAQCV C+VR G+P+P+T+R+TQ W   G + G     + +  P  VL V   ++  +  P    VA AG G   P    GP G + G  G                A G+P  ++  K K+                                  +    PG R  DG   G   Q GA+ G G  G  AG                       MP WRQ+ P+  L+ DYLDY+VRE ER+YYKSAGILPYR DP +GEVW+L+GSE+RKNKLV+SCL GKRED DAGPEHTAWREFWEESGKVL + +RA FLT+C+EGRARAMW+QSAKMAV+ CE  SP +V LPR + +G   VDK DTSM+ALHWVSATELH AC+ RGG VVVWGP
Sbjct:   23 RWVVTHGSGFHHLPELIGQHKLQLPDHLRSWTDAARMCGWEAERLNVGIAAYNAAATGQEGSGXXXXXXXRHAPRSGSRGAXXXAESAGARSRGRKKPTIKHSLPQSGLPGMLKFLGCPKEPDIAHRTRRGMNVVESLAQCVVCMVRLGIPIPVTSRITQEWAGGGGYAGCHHNELSIDQPQVVLKVV--RYGPDGLPAEGAVAAAGTG---PVVRLGPQGVMGG--GPLIMNAPNPTAGINGSASGAPTQQQPQKTKKXXXXXXXXXXXXXXXXXXXXXXXXXXGPAQHQHQQHQLRPGARPGDGLGGGPQWQNGAL-GGGWVGGAAGVGGGRGQP---------------MPHWRQNVPINSLAPDYLDYFVRERERQYYKSAGILPYRRDPSSGEVWVLVGSEIRKNKLVVSCLGGKREDSDAGPEHTAWREFWEESGKVLGDDERANFLTTCFEGRARAMWMQSAKMAVIACELGSPDLVSLPRRFGLGDPGVDKRDTSMIALHWVSATELHNACNKRGGTVVVWGP 530          
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Match: A0A6H5KXJ7_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ7_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 5.680e-116
Identity = 233/528 (44.13%), Postives = 281/528 (53.22%), Query Frame = 0
Query:    1 RWIVCGDVGLRFVPELMGHANLQLPSHLRSWTDAARACAREADLQN----------------------------------GWDVTSGQMNPSPKKPNLNS--PNSGLGGMLKFLGAPREKLPYNHTRRGAQTVSGLAQCVACLVRAGVPLPITARVTQTWGAAGAFEGTRLTAIPVVLPPGVLPVASSQFDTEAPPVARAGGGERPPSQGRGPVGTL----VGAAGAXXXXXXXXXXXXXXXAGGSPRPERRDKKKRSKKDRS--------------------------------PGKRAADGAATGAIGQGGAVVGSGLDGNGAGXXXXXXXXXXXXXXXXXXXXXXAMPEWRQSNPVVPLSADYLDYYVRETERKYYKSAGILPYRHDPVTGEVWILLGSEVRKNKLVLSCLAGKREDKDAGPEHTAWREFWEESGKVLSEVDRAAFLTSCYEGRARAMWIQSAKMAVLTCEFSSPAIVDLPRLYAVGGRDVDKSDTSMLALHWVSATELHRACHLRGGKVVVWGP 456
            RW+V    G   +PEL+G   LQLP HLRSWTDAAR C  EA+  N                                        G  +   KKP +    P SGL GMLKFLG P+E    + TRRG + V  LAQCV C+VR G+P+P+T+R+TQ W   G + G     + +  P  VL V   ++  +  PV  A       + G GP+  L    V   GA               A G+P  ++  K K+  K  S                                PG R  DG   G   Q GA  G G  G  AG                       MP WRQ+ P+  L+ DYLDY+VRE ER+YYKSAGILPYR DP +GEVW+L+GSE+RKNKLV+SCL GKRED DAGPEHTAWREFWEESGKVL + +RA FLT+C+EGRARAMWIQSAKMAV+ CE  SP +V LPR + +GG  VDK DTSM+ALHW+SATELH AC+ RGG VVVWGP
Sbjct:  298 RWVVTHGSGFHHLPELIGQHKLQLPDHLRSWTDAARMCGWEAERLNVRIAAYNAEATGQGXXXXXXXXRCAPRSGSRGXXXXXXXXGARSRGKKKPMIKHSLPQSGLPGMLKFLGCPKEPDIAHRTRRGMKVVESLAQCVVCMVRLGIPIPVTSRITQEWAGGGGYAGCHHDELSIDEPQVVLKVV--RYGPDGLPVDGAVA-----AAGTGPIVRLGPQVVVGGGALIVNAPNPTAGINGSASGAPTQQQPHKAKKKNKRGSAHNGVSANGVYAEGPPFVGGPAQQXXXXXXLGPGARPGDGLGVGPQLQNGAS-GGGWVGEAAGVGGGRGQP---------------MPHWRQNAPINSLAPDYLDYFVRERERQYYKSAGILPYRRDPSSGEVWVLVGSEIRKNKLVVSCLGGKREDSDAGPEHTAWREFWEESGKVLGDDERANFLTTCFEGRARAMWIQSAKMAVIACELGSPDLVSLPRRFGLGGPGVDKRDTSMIALHWISATELHNACNKRGGTVVVWGP 802          
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Match: A0A836CHE9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.520e-16
Identity = 64/180 (35.56%), Postives = 86/180 (47.78%), Query Frame = 0
Query:  290 LSADYLDYYVRETERKYYKSAGILPYRHDPVT--GEVWILLGSEVRKNKLVLSCLAGKREDKDAGPEHTAWREFWEESGKVLSEVDRAAFLTSCYEGRARAMWIQSAKMAV------------LTCEFSSPAIVDLPRLY--------AVG----GRDVDKSDTSMLALHWVSATELHRA 443
            LS++Y    +R  E  +YK+AGILP    P    G   +LLG E+RK    +  + GKRED+D  P  TAWRE WEESGKVL+   R AF+ +   G AR +W++  K  +            L   F+  A                 VG    G   D+S+T++L L WV   EL  A
Sbjct:  133 LSSNYAGPALRPREADWYKAAGILPLATLPPERGGCAAVLLGVEMRKGAQCIGHMGGKREDRDGRPAETAWRETWEESGKVLTREARQAFMAATDSGAARVLWVRDCKQVLYAYRVPVEWGDALAVAFNGAAAXXXXXXXXXXXXXGSGVGPTRAGATADRSNTTLLELRWVPVRELEAA 312          
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Match: A0A836CI15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI15_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.380e-15
Identity = 47/96 (48.96%), Postives = 58/96 (60.42%), Query Frame = 0
Query:  305 KYYKSAGILPYRHDPVT--GEVWILLGSEVRKNKLVLSCLAGKREDKDAGPEHTAWREFWEESGKVLSEVDRAAFLTSCYEGRARAMWIQSAKMAV 398
            +YYK+AGILP    P    G + +LL  EVRK K +L  + GKRE  D GP  TAWRE WEESGKVLS   RA FL +   G  R +W+   + A+
Sbjct:   73 EYYKAAGILPLAWLPEDRGGHLAVLLAMEVRKGKRLLGHMGGKREAADKGPAFTAWREAWEESGKVLSSNARATFLAAAESGDTRVLWVPECEQAI 168          
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Match: L8GIW6_ACACA (Hydrolase, NUDIX domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIW6_ACACA)

HSP 1 Score: 64.3 bits (155), Expect = 3.500e-7
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 0
Query:  325 WILLGSEVRK-----NKLVLSCLAGKREDKDAGPEHTAWREFWEESGKVLSEVDRAAFLTSCYEG--RARAMWIQSAKMAVLTCEFSSPAIVDLPRLYAVGGRDVDKSD--TSMLALHWVSATELHRA 443
            ++LLG E R+     +++ ++   GKRED D     TAWREFWEE+G++L +  +  FL  C +G  R R +W    K  +       PA     +L A   R ++  +  + M +LHWVS   L +A
Sbjct:  146 YVLLGCETRRKQVKTDEVYINLFGGKREDSDGSAAETAWREFWEETGRLLPDQAQP-FLDHCRDGADRRRVLWFAPGKYVLFLYHLPYPAPEWTTKL-AEQYRQLETREEGSEMDSLHWVSLPALLKA 271          
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Match: A0A7S3DB98_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DB98_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 1.100e-5
Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 0
Query:  307 YKSAGILPY-RHDPVTGEV--WILLGSEVRKNK-LVLSCLAGKREDKDAGPEHTAWREFWEESGKVLSEVDRAAFLTSCYE-----GRARAMWIQSAK 395
            Y++AG+LP  R    +GEV  W+L+G E+R +K   ++ L GK E  D    HTA REF+EESG +LSE  R   L    +     G+AR +WI   K
Sbjct:  148 YRAAGVLPVMRVKEDSGEVRLWVLMGEEMRSDKGYSINPLGGKIEKIDETGAHTAVREFFEESGGLLSEEHRDHLLAHVMQRGGKGGKARCVWIPGGK 245          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12200.1379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSB6_ECTSI3.270e-11743.69Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6H5KXJ7_9PHAE5.680e-11644.13Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A836CHE9_9STRA1.520e-1635.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI15_9STRA1.380e-1548.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L8GIW6_ACACA3.500e-733.59Hydrolase, NUDIX domain containing protein n=1 Tax... [more]
A0A7S3DB98_9EUKA1.100e-541.84Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 475..519
NoneNo IPR availableGENE3D3.90.79.10coord: 291..507
e-value: 9.7E-6
score: 27.2
NoneNo IPR availablePANTHERPTHR23196PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINcoord: 250..519
NoneNo IPR availablePANTHERPTHR23196:SF24coord: 250..519
IPR008120Dense granule Gra7 proteinPRINTSPR01747DENSEGRNULE7coord: 101..119
score: 44.74
coord: 178..197
score: 60.0
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 305..457
score: 9.879
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 282..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12200contigS-dermatodea_contig12200:1036..5979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12200.1379.1mRNA_S-dermatodea_contig12200.1379.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12200 1036..5980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12200.1379.1 ID=prot_S-dermatodea_contig12200.1379.1|Name=mRNA_S-dermatodea_contig12200.1379.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=677bp
RWIVCGDVGLRFVPELMGHANLQLPSHLRSWTDAARACAREADLQNGWDV
TSGQMNPSPKKPNLNSPNSGLGGMLKFLGAPREKLPYNHTRRGAQTVSGL
AQCVACLVRAGVPLPITARVTQTWGAAGAFEGTRLTAIPVVLPPGVLPVA
SSQFDTEAPPVARAGGGERPPSQGRGPVGTLVGAAGAAAAAAAAGAGSTS
TDAGGSPRPERRDKKKRSKKDRSPGKRAADGAATGAIGQGGAVVGSGLDG
NGAGGGVGQGGGAVAVGVRGGGGGGGAMPEWRQSNPVVPLSADYLDYYVR
ETERKYYKSAGILPYRHDPVTGEVWILLGSEVRKNKLVLSCLAGKREDKD
AGPEHTAWREFWEESGKVLSEVDRAAFLTSCYEGRARAMWIQSAKMAVLT
CEFSSPAIVDLPRLYAVGGRDVDKSDTSMLALHWVSATELHRACHLRGGK
VVVWGPPPPSLSALAAQSATPPSPLQQQQQKEQQQRQKQQQQRRQQQQQR
EQEQRRQQEQQELLAAEAELGQNNVWTPSSWREPSSGKQQQQQQPQQQQQ
QQQKQQKQPLVAGVAPEQTNVWKPSSWGEPSLGKQQQQQQQPPLVAEVAS
GQNNVWTPRSWQGPSPGKQQQPLVVEVTSGQNDVWTPSSWREPSPGKQQQ
QQPPLVAEVASGQNNVWTPSSWRGPSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008120Dense_granule_Gra7_protein
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf