prot_S-dermatodea_contig12188.1367.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12188.1367.1
Unique Nameprot_S-dermatodea_contig12188.1367.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length591
Homology
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A6H5KF81_9PHAE (Arf-GAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF81_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 2.350e-130
Identity = 369/547 (67.46%), Postives = 404/547 (73.86%), Query Frame = 0
Query:   61 MQEQYLPADVVKSTFRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMADPSL-EPPLSPKADPAQAVTCGLDRLLLDVEGKPATNGASGGDGPGEIVR----------ADSSSAEAKFAQAFPSQSVSAPTKXXXXXXXXXXXXPSSQGAAALTSAETAAPQESAPVRPYEPEARGSLMVSPPSVPAEESRAASPE--VPLMRLSSSKSPPPRARKGGPKKLXXXXXXXXXXXSGGGVVKLSGFDVPEAAATAPAAPSSGPSAQ---ESDLELARKLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFDKNKYKNVKGIGSDMLFGAQDDDPQEQARRAMKVQEYSGSAAISSDMFFDREGENAGYDGAAGGVGGIGDMAEQIAISAAAELQGAAQAANKLK 591
            MQ+QYLP DVVKSTFRRLRSK DNKVCFDC TRNPTWASATYGIFICYDCSAVHR+MGVHVTFVRSIELDKWKP+E+E MKRGGNGNAR+FFRSHG+TDMEK+EQKYHSRAAQMYR HLKK MADP +  PP SP+ DP   V  GLDRL+ D++GKPA +  + G   G               D+++A AKFAQAFPS   +APT               S  A    +A+  AP  +APV+PYEP+ RGSL VSPP+ PA  + A       P++RL SSKSPPPR RKGG KK+XXXXXXXXXXXSGG  VKLSGF+    A                 ++DL LARKL  XXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +FDK KYKNVKGIGSDMLFGA+DDDP EQARRAMK QEYS SAAISSDM+              GGVG  GDMA+QIA SAAA      QAA KLK
Sbjct:    1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDNVADGLDRLMEDMDGKPAASAPAKGFTNGGXXXXXXXXXXXPSVDAAAAAAKFAQAFPSSHPAAPTSG-------------SAAAGGHAAADVPAPP-AAPVKPYEPKPRGSLSVSPPTAPAAAAGAVDEPKATPVVRLISSKSPPPRIRKGGAKKMXXXXXXXXXXXSGGAAVKLSGFEDTTTAXXXXXXXXXXXXXXXXXDADLALARKLXXXXXXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-SFDKGKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYXXXXXXXXXXXXYDGGVG-FGDMADQIAASAAA------QAAGKLK 525          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A835YU03_9STRA (Arf-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU03_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.010e-59
Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 0
Query:   65 YLPADVVKSTFRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMA---DPSLEPPLSPK----ADPAQAVTCGLDRLLLDVE 214
            Y+ AD+VKSTFRRL++  DNKVCFDC TRNPTWAS TYGIF+CYDCSAVHR+MGVH+TFVRS+ELDKW+  E+++MKRGGN  ARA+F+SHG++DM KT+ KY SRAA+ YR HLK+++A   DP+ +   S      AD A A+ CGLDR++ D+E
Sbjct:    7 YVEADLVKSTFRRLQAHRDNKVCFDCPTRNPTWASVTYGIFLCYDCSAVHRNMGVHITFVRSVELDKWRQWELDSMKRGGNAAARAYFQSHGVSDMGKTDAKYRSRAAEAYRAHLKQLIAETPDPAADVWNSAHGARDADEA-AIACGLDRIMRDIE 162          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A4D9D0S2_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0S2_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.900e-47
Identity = 90/166 (54.22%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   73 STFRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMADP------SLEPPLSPKADPAQAVTCGLDRLLL---DVEGKPATNGASGGDGPG 229
            + F+R++S+ +N+VCFDC TRNPTWASATYG+FICY+CSA HR++GVH+TFVRS++LD+W P ++  M+ GGN NA  FFR HG+T   K EQKY SRAA++Y+ HL K++AD       +LEPP  P  D   AV CGLD L+L   + E  P   GA   DG G
Sbjct:   12 AAFKRMKSRPENQVCFDCPTRNPTWASATYGVFICYNCSATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGGKVEQKYSSRAAELYKAHLSKLVADKILMDANALEPP--PPTDTVAAVGCGLDNLMLSYQEPEDVPV-GGAGSSDGEG 174          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A7S2B6H1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6H1_9STRA)

HSP 1 Score: 177 bits (450), Expect = 9.620e-46
Identity = 87/156 (55.77%), Postives = 112/156 (71.79%), Query Frame = 0
Query:   61 MQEQYLPADVVKSTFRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDME-KTEQKYHSRAAQMYRTHLKKVMADPSLEPPLSPKADPAQAVTCGLDRLLLDVEG 215
            M  +Y+  +V  S F++LR+K  NKVCFDC +RNPTWASAT+GIFIC DCSA HR MGVH+TFVRS+ELD+W P +++ MK GGN NA  FFRSHG+ DM  K EQKY S AA+ Y+ HLKK+M+   +E       +P +  +  +D LLLDV+G
Sbjct:    1 MNGKYVTQEVKNSAFKKLRTKGANKVCFDCSSRNPTWASATFGIFICLDCSASHRRMGVHITFVRSVELDEWTPDQLKMMKVGGNENAGTFFRSHGVRDMHIKHEQKYVSSAARQYKNHLKKLMSTEDVE---EVPEEPQRKPSVDIDSLLLDVQG 153          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A7S2SFF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.600e-45
Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 0
Query:   66 LPADVVKSTFRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDME-KTEQKYHSRAAQMYRTHLKKVMADPSLEPPLSPKADPAQAVTCGLDRLLLDVEG--KPATNGASGGDGP 228
            +P++   S F+RL++K DN++CFDC TRNPTWASAT+G+F+C DCSA HR MGVHVTFVRS+ELD+W   ++  M+ GGNGNA AFFRSHG+ D+  KTE+KY S AA+ Y+ HLKK++ +   +P  +         T  LD +  D     + A  G S  D P
Sbjct:   16 VPSEAKTSFFKRLKAKRDNRICFDCPTRNPTWASATFGVFLCLDCSAAHRRMGVHVTFVRSVELDEWTEKQLRTMEVGGNGNAAAFFRSHGVRDLHIKTEEKYQSSAARHYKNHLKKLLEEAPPKPIETQDVGAKTGATDPLDDMFADEMDAQEEAPRGQSASDAP 181          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A7J0GY13_9ERIC (ARF-GAP domain 9 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GY13_9ERIC)

HSP 1 Score: 152 bits (383), Expect = 1.410e-39
Identity = 75/150 (50.00%), Postives = 99/150 (66.00%), Query Frame = 0
Query:   75 FRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMADPSLEP---PLSPKADPAQAVTCGLDRLLLDVEGKPATNG 221
            FR+L++K++NK+CFDC  +NPTWAS TYGIF+C DCSAVHRS+GVHV+FVRS  LD W P +++ M  GGN  A+ FF+ HG  D  K E KY SRAA++YR  L K +A  S+E    P SP A  +   + GL    +    K  ++G
Sbjct:   14 FRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQLKMMSFGGNNRAQVFFKQHGWNDGGKIEAKYTSRAAELYRQLLTKEVAKSSVEDTGLPSSPVAYQSAQASNGLPDFKISETPKETSSG 163          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: V7CJD9_PHAVU (Arf-GAP domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CJD9_PHAVU)

HSP 1 Score: 159 bits (401), Expect = 1.820e-39
Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 0
Query:   75 FRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMA----DPSLEPPLSPKADPAQAVTCGLDRL 209
            FR+L++K++NK+CFDC  +NPTWAS TYGIF+C DCSA HRS+GVHV+FVRS  LD W P +++ M  GGN  AR FF+ HG TD  KT+ KY SRAA++Y+  L K +A    +  L+ P SP A P + V  GL +L
Sbjct:   13 FRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAAHRSLGVHVSFVRSTNLDMWSPEQLKTMSLGGNNRARNFFKQHGWTDGGKTDAKYTSRAAELYKQILSKEVAKSMTEKELDSPSSPTASPFEQVVEGLPQL 151          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A1D6GD40_MAIZE (ADP-ribosylation factor GTPase-activating protein AGD10 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6GD40_MAIZE)

HSP 1 Score: 150 bits (379), Expect = 1.940e-39
Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 0
Query:   75 FRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKK 181
            FRRL++K +NK+CFDC  +NPTWAS TYGIF+C DCSAVHRS+GVH+TFVRS  LD W P +++ M  GGN  A AFF+ HG TD  K E KY SRAA++YR  L K
Sbjct:   20 FRRLKAKPENKMCFDCNAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVEAKYTSRAAELYRQMLNK 126          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: UPI0005D3D7AE (probable ADP-ribosylation factor GTPase-activating protein AGD8 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D3D7AE)

HSP 1 Score: 158 bits (400), Expect = 2.910e-39
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 0
Query:   75 FRRLRSKADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMADPSLEPPLSPK---ADPAQAVTCGLDRLLL 211
            FR+L+S+++NK+CFDC  +NPTWAS TYGIF+C DCSAVHRS+GVH++FVRS  LD W P +++ M  GGN  A+ FF+ HG TD  K E KY SRAA++YR  L K +A    E P SP+   A PA     GL  + L
Sbjct:   13 FRKLKSRSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYRQLLSKEVAKSLTEDPTSPRSPLASPANQTVNGLSHVKL 152          
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Match: A0A7S3Y2V3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2V3_HETAK)

HSP 1 Score: 160 bits (404), Expect = 4.350e-39
Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 0
Query:   82 ADNKVCFDCRTRNPTWASATYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARAFFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMADP-----SLEPPLSPKADPAQAVTCGLDRLLLDVEGKPATNGAS 223
            ++N+ CFDC TRNPTWASATYGIFICYDCS+VHR+MGVH+TFVRS +LD+W+P ++E MK GGNGNA+ +FR HG T  E  E+KY  R AQMY+THL K++        ++EP   P+         GLD LL+ + G P  NG S
Sbjct:    3 SENRTCFDCPTRNPTWASATYGIFICYDCSSVHRNMGVHITFVRSCDLDEWRPDQLERMKLGGNGNAKLYFRQHGNTGKE-GERKYTHRVAQMYKTHLDKLVNQKLSEGNNIEP--EPEFKQNDGSVDGLDALLMGL-GSPRNNGDS 145          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12188.1367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF81_9PHAE2.350e-13067.46Arf-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YU03_9STRA2.010e-5963.06Arf-GAP domain-containing protein n=1 Tax=Tribonem... [more]
A0A4D9D0S2_9STRA1.900e-4754.22Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A7S2B6H1_9STRA9.620e-4655.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SFF1_9STRA3.600e-4550.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7J0GY13_9ERIC1.410e-3950.00ARF-GAP domain 9 n=1 Tax=Actinidia rufa TaxID=1657... [more]
V7CJD9_PHAVU1.820e-3953.96Arf-GAP domain-containing protein n=1 Tax=Phaseolu... [more]
A0A1D6GD40_MAIZE1.940e-3962.62ADP-ribosylation factor GTPase-activating protein ... [more]
UPI0005D3D7AE2.910e-3953.57probable ADP-ribosylation factor GTPase-activating... [more]
A0A7S3Y2V3_HETAK4.350e-3955.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 84..103
score: 50.34
coord: 124..145
score: 41.54
coord: 103..120
score: 54.98
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 72..189
e-value: 1.7E-44
score: 163.8
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 73..176
e-value: 1.1E-33
score: 115.8
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 72..189
score: 25.978
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 62..191
e-value: 2.5E-48
score: 165.6
NoneNo IPR availablePANTHERPTHR45686FAMILY NOT NAMEDcoord: 72..587
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 72..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12188contigS-dermatodea_contig12188:1193..6340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12188.1367.1mRNA_S-dermatodea_contig12188.1367.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12188 1193..6340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12188.1367.1 ID=prot_S-dermatodea_contig12188.1367.1|Name=mRNA_S-dermatodea_contig12188.1367.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=591bp
PKHFFFATITDSSQHPAQTAAHQSKQRTARANANFEFSGPREARNRTRGR
EVRSRPTCLPMQEQYLPADVVKSTFRRLRSKADNKVCFDCRTRNPTWASA
TYGIFICYDCSAVHRSMGVHVTFVRSIELDKWKPAEVEAMKRGGNGNARA
FFRSHGITDMEKTEQKYHSRAAQMYRTHLKKVMADPSLEPPLSPKADPAQ
AVTCGLDRLLLDVEGKPATNGASGGDGPGEIVRADSSSAEAKFAQAFPSQ
SVSAPTKTHSAPTSVAHAPPSSQGAAALTSAETAAPQESAPVRPYEPEAR
GSLMVSPPSVPAEESRAASPEVPLMRLSSSKSPPPRARKGGPKKLGARKL
GAMKLGSGGGVVKLSGFDVPEAAATAPAAPSSGPSAQESDLELARKLQQE
EDAAAAALPSSRLAAAATAALATQSLSSSSKKNGPSGGSIYRSTNDSSSS
SSGGANGGTYRNGGGGGFGVSGGSVSSYGSAGAGGGGSSYGGGGGTFDKN
KYKNVKGIGSDMLFGAQDDDPQEQARRAMKVQEYSGSAAISSDMFFDREG
ENAGYDGAAGGVGGIGDMAEQIAISAAAELQGAAQAANKLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO