prot_S-dermatodea_contig12149.1336.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12149.1336.1
Unique Nameprot_S-dermatodea_contig12149.1336.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length205
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig12149.1336.1 vs. uniprot
Match: A0A6H5JZ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ72_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 8.390e-49
Identity = 108/208 (51.92%), Postives = 127/208 (61.06%), Query Frame = 0 
Query:    8 LEEAVRRLMKDYDTARREVLYGLDEHGRPLEENG--GEE--SGDERPLLPREPVSFRTLRTLPKRDLSPPIHLDTGSKHIG----GAEDRVGGVPLEAGEGGGDDEA----------DETPNYVLVMQERHKLGSSATMARGAFLFSLVGLSADLTKKQVCMRGCWRLSDSLEAGRFVLSGLWKALRPPPGLFGSIRRAQQSIASFCC 197
            LEEAV R+MKDY  AR+EVLYGLD+ GRPLEE    G E   G   P +PREPVS   L++L KR+  P     TGS +I     G     GGVP  + E    DE              PN+VLVM+ER KLGSSATMARGAFLFSL GL + LTKK+V   G WR S S EA RF++SGLW A+RPPPGL G++      +A  CC
Sbjct:  162 LEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASLGREVDRGGRSPSIPREPVSLEDLQSLSKREKLP----RTGSINISVLKNGLSTTAGGVPASSKEAQVSDEIAGRRKERDPLGGVPNHVLVMKERQKLGSSATMARGAFLFSLSGLCSALTKKRVSRAGGWRPSQSAEAARFIISGLWTAIRPPPGLLGALSSTAGLLAPRCC 365
[Close]
BLAST of mRNA_S-dermatodea_contig12149.1336.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 6.860e-46
Identity = 110/211 (52.13%), Postives = 135/211 (63.98%), Query Frame = 0 
Query:    8 LEEAVRRLMKDYDTARREVLYGLDEHGRPLEE--NGGEE--SGDERPLLPREPVSFRTLRTLPKRDLSPPIHLD-TGSKHIGGAEDRV----GGVPLEAGE-------GGGDDEADE---TPNYVLVMQERHKLGSSATMARGAFLFSLVGLSADLTKKQVCMRGCWRLSDSLEAGRFVLSGLWKALRPPPGLFGSIRRAQQSIASFCCGR 199
            LEEAV R+MKDY  AR+EVLYGLD+ GRPLEE  + G E  SG   P LPR+PVS   L++L KR     I+L  TGS ++ G ++ +    GG+P  + E       GG   E D     PN+VLVM+ER KLGS+ATMARGAFLFSL GL + LTKK+V   G WR S S EA RFV SGLW A+RPPPGL G++      +A+ C  R
Sbjct:  467 LEEAVSRMMKDYQRARKEVLYGLDDLGRPLEEVASSGREVDSGGRSPSLPRDPVSLEDLQSLSKR-----INLPRTGSINLSGLKNGLSTTAGGLPARSKEAEVSEGIGGRRREGDPLGGVPNHVLVMKERQKLGSAATMARGAFLFSLSGLCSALTKKRVNRTGGWRPSQSAEAARFVFSGLWTAIRPPPGLLGALSSTPGFLAARCFRR 672
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12149.1336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZ72_9PHAE8.390e-4951.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD61_ECTSI6.860e-4652.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12149contigS-dermatodea_contig12149:1401..3421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12149.1336.1mRNA_S-dermatodea_contig12149.1336.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12149 1401..3421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12149.1336.1 ID=prot_S-dermatodea_contig12149.1336.1|Name=mRNA_S-dermatodea_contig12149.1336.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=205bp
LPEVAELLEEAVRRLMKDYDTARREVLYGLDEHGRPLEENGGEESGDERP
LLPREPVSFRTLRTLPKRDLSPPIHLDTGSKHIGGAEDRVGGVPLEAGEG
GGDDEADETPNYVLVMQERHKLGSSATMARGAFLFSLVGLSADLTKKQVC
MRGCWRLSDSLEAGRFVLSGLWKALRPPPGLFGSIRRAQQSIASFCCGRT
KPKPV
back to top